RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 MRVI1Q9Y6F6 885 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 RFXAPO00287 272 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 DGKDQ16760 1214 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 GDF6Q6KF10 455 aaPredicted RBP15.13■□□□□ 0.01
SF3B3-202ENST00000562722 HERC6Q8IVU3 1022 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 CAGE1Q8TC20 777 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 PHOSPHO2Q8TCD6 241 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 AFAP1L1Q8TED9 768 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 ARNTL2Q8WYA1 636 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 ANKS1AQ92625 1134 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 AMNQ9BXJ7 453 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 JMJD4Q9H9V9 463 aa15.13■□□□□ 0.01
SF3B3-202ENST00000562722 TLL1O43897 1013 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 EIF3JO75822 258 aaKnown RBP15.12■□□□□ 0.01
SF3B3-202ENST00000562722 BAIAP3O94812 1187 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 IGHDP01880 384 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 MYCLP12524 364 aaPredicted RBP15.12■□□□□ 0.01
SF3B3-202ENST00000562722 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 ZBED2Q9BTP6 218 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 KATNAL1Q9BW62 490 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 PXMP2Q9NR77 195 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
SF3B3-202ENST00000562722 LAMA4Q16363 1823 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 SCN5AQ14524 2016 aa15.12■□□□□ 0.01
SF3B3-202ENST00000562722 SORBS3O60504 671 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 NR3C2P08235 984 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 SELPP16109 830 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 PSEN2P49810 448 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 LAMC2Q13753 1193 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 AAK1Q2M2I8 961 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 SESTD1Q86VW0 696 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 DHX37Q8IY37 1157 aaKnown RBP15.11■□□□□ 0.01
SF3B3-202ENST00000562722 KAT2BQ92831 832 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 HDAC6Q9UBN7 1215 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 TTC28Q96AY4 2481 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 MYO9BQ13459 2157 aa15.11■□□□□ 0.01
SF3B3-202ENST00000562722 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 KLRF2D3W0D1 207 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 TFF2Q03403 129 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 TAP1Q03518 808 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 MFSD10Q14728 455 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 HOMER1Q86YM7 354 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 PPTC7Q8NI37 304 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 GTF2IRD1Q9UHL9 959 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 PCDHA1Q9Y5I3 950 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 MTCH2Q9Y6C9 303 aa15.1■□□□□ 0.01
SF3B3-202ENST00000562722 EPOPA6NHQ4 379 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 HOXA13P31271 388 aaPredicted RBP15.09■□□□□ 0.01
SF3B3-202ENST00000562722 WDR5P61964 334 aaKnown RBP15.09■□□□□ 0.01
SF3B3-202ENST00000562722 TRDNQ13061 729 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 KIAA0753Q2KHM9 967 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 CNKSR3Q6P9H4 555 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 TMCO2Q7Z6W1 182 aaPredicted RBP15.09■□□□□ 0.01
SF3B3-202ENST00000562722 EXOC6Q8TAG9 804 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 DHX38Q92620 1227 aaKnown RBP15.09■□□□□ 0.01
SF3B3-202ENST00000562722 EMID1Q96A84 441 aaPredicted RBP15.09■□□□□ 0.01
SF3B3-202ENST00000562722 CTAGE1Q96RT6 745 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 CHD9Q3L8U1 2897 aa15.09■□□□□ 0.01
SF3B3-202ENST00000562722 ZBTB5O15062 677 aa15.08■□□□□ 0
SF3B3-202ENST00000562722 ARHGEF15O94989 841 aa15.08■□□□□ 0
SF3B3-202ENST00000562722 PARNO95453 639 aaKnown RBP15.08■□□□□ 0
SF3B3-202ENST00000562722 CKBP12277 381 aa15.08■□□□□ 0
SF3B3-202ENST00000562722 HSD17B4P51659 736 aa15.08■□□□□ 0
SF3B3-202ENST00000562722 KRT40Q6A162 431 aa15.08■□□□□ 0
SF3B3-202ENST00000562722 SPATA33Q96N06 139 aa15.08■□□□□ 0
SF3B3-202ENST00000562722 NECAB3Q96P71 396 aaPredicted RBP15.08■□□□□ 0
SF3B3-202ENST00000562722 ERICH2A1L162 156 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 OPLAHO14841 1288 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 PPP1R11O60927 126 aaPredicted RBP15.07■□□□□ 0
SF3B3-202ENST00000562722 GGPS1O95749 300 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 F2P00734 622 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 COL9A1P20849 921 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 KCNQ1P51787 676 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 DEFB103AP81534 67 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 TRAF1Q13077 416 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 PTK7Q13308 1070 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 GRB10Q13322 594 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 KCNV1Q6PIU1 500 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 FCHSD1Q86WN1 690 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 PDCD2LQ9BRP1 358 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 MAD2L2Q9UI95 211 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 MTUS1Q9ULD2 1270 aa15.07■□□□□ 0
SF3B3-202ENST00000562722 LCHNA4D1U4 455 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 GCOM1H8Y6P7 765 aaPredicted RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 IFIT3O14879 490 aaKnown RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 NBNO60934 754 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 POLR2MP0CAP2 368 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 POU3F3P20264 500 aaPredicted RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 CCND2P30279 289 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 ZNF200P98182 395 aaPredicted RBP15.06■□□□□ 0
SF3B3-202ENST00000562722 RBL2Q08999 1139 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 IKBKEQ14164 716 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 PGM5Q15124 567 aa15.06■□□□□ 0
SF3B3-202ENST00000562722 SEC23AQ15436 765 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms