RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 H0Y858 1186 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 MEN1O00255 615 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 B4GALT4O60513 344 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 FLOT1O75955 427 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 BAG3O95817 575 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 ITGA7Q13683 1181 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 CCDC27Q2M243 656 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 ZNF792Q3KQV3 632 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 CERKLQ49MI3 558 aaPredicted RBP6.5□□□□□ -1.37
HERC1-213ENST00000561359 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 CXCL17Q6UXB2 119 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 TBC1D9Q6ZT07 1266 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 NOL8Q76FK4 1167 aaKnown RBP6.5□□□□□ -1.37
HERC1-213ENST00000561359 ATG9AQ7Z3C6 839 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 RNF135Q8IUD6 432 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 FBXL6Q8N531 539 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 NEK9Q8TD19 979 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 NSUN4Q96CB9 384 aaKnown RBP6.5□□□□□ -1.37
HERC1-213ENST00000561359 VWCEQ96DN2 955 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 ATG4CQ96DT6 458 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 POP1Q99575 1024 aaKnown RBP6.5□□□□□ -1.37
HERC1-213ENST00000561359 FTOQ9C0B1 505 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERC1-213ENST00000561359 SUGCTQ9HAC7 445 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 CABP5Q9NP86 173 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 TLR9Q9NR96 1032 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 AATFQ9NY61 560 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERC1-213ENST00000561359 ZNF236Q9UL36 1845 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 FLT1P17948 1338 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 PDS5AQ29RF7 1337 aaKnown RBP6.5□□□□□ -1.37
HERC1-213ENST00000561359 CHD6Q8TD26 2715 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 EP300Q09472 2414 aaPredicted RBP6.49□□□□□ -1.37
HERC1-213ENST00000561359 LCHNA4D1U4 455 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 PRR23AA6NEV1 266 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 PROB1E7EW31 1015 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 VAMP4O75379 141 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 CABYRO75952 493 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 SNAI1O95863 264 aaPredicted RBP6.49□□□□□ -1.37
HERC1-213ENST00000561359 KCNJ6P48051 423 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 GJA9P57773 515 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 BEX3Q00994 111 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 VAC14Q08AM6 782 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 ACVR2BQ13705 512 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 MCM6Q14566 821 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 TMEM132BQ14DG7 1078 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 ABCB5Q2M3G0 1257 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 CCDC144BQ3MJ40 725 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 CYP2U1Q7Z449 544 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 MSL3Q8N5Y2 521 aaKnown RBP6.49□□□□□ -1.37
HERC1-213ENST00000561359 SLC43A3Q8NBI5 491 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 CNTNAP3BQ96NU0 1288 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 TGS1Q96RS0 853 aaKnown RBP6.49□□□□□ -1.37
HERC1-213ENST00000561359 CRBNQ96SW2 442 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 FSD1Q9BTV5 496 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 CNTNAP3Q9BZ76 1288 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 UPF3AQ9H1J1 476 aaKnown RBP6.49□□□□□ -1.37
HERC1-213ENST00000561359 LRP2BPQ9P2M1 347 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 DMXL1Q9Y485 3027 aa6.49□□□□□ -1.37
HERC1-213ENST00000561359 KMT2BQ9UMN6 2715 aaPredicted RBP6.48□□□□□ -1.37
HERC1-213ENST00000561359 ZFHX4Q86UP3 3567 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 ADCY6O43306 1168 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 CYP2C9P11712 490 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 RFX5P48382 616 aaPredicted RBP6.48□□□□□ -1.37
HERC1-213ENST00000561359 VCPP55072 806 aaKnown RBP6.48□□□□□ -1.37
HERC1-213ENST00000561359 TIMM10P62072 90 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 SLFNL1Q499Z3 407 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 NAA16Q6N069 864 aaPredicted RBP6.48□□□□□ -1.37
HERC1-213ENST00000561359 PI16Q6UXB8 463 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 LYSMD3Q7Z3D4 306 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 DGLUCYQ7Z3D6 616 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 RNF217Q8TC41 542 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 DDX11Q96FC9 970 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 SEZ6LQ9BYH1 1024 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 CLDND1Q9NY35 253 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 CTNNA3Q9UI47 895 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 SERPINB13Q9UIV8 391 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 SPTBN2O15020 2390 aa6.48□□□□□ -1.37
HERC1-213ENST00000561359 ANKRD11Q6UB99 2663 aaPredicted RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 MPHOSPH10O00566 681 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 ZEB2O60315 1214 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 CIAO1O76071 339 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 SUPT20HL2P0C7V6 817 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 AVPR2P30518 371 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 RFC2P35250 354 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 STAT3P40763 770 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 IL15P40933 162 aaPredicted RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 SCTRP47872 440 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 ERVK-21P61565 698 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 PSMC6P62333 389 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 MVPQ14764 893 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 SEPT2Q15019 361 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 CLUL1Q15846 466 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 FSCN1Q16658 493 aaKnown RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 PTPROQ16827 1216 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 TIGD5Q53EQ6 642 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 GORABQ5T7V8 394 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 TATDN1Q6P1N9 297 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 TMCO2Q7Z6W1 182 aaPredicted RBP6.47□□□□□ -1.37
HERC1-213ENST00000561359 RIOX2Q8IUF8 465 aa6.47□□□□□ -1.37
HERC1-213ENST00000561359 SPICE1Q8N0Z3 855 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms