RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP8-218ENST00000561330 AP5M1Q9H0R1 490 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 CNTD2Q9H8S5 307 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 MBD1Q9UIS9 605 aaPredicted RBP7.09□□□□□ -1.27
USP8-218ENST00000561330 AQP7O14520 342 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 C8AP07357 584 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 GLDCP23378 1020 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 SLC9A5Q14940 896 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 SH3TC2Q8TF17 1288 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 TRAF6Q9Y4K3 522 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 HCFC2Q9Y5Z7 792 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 ASXL2Q76L83 1435 aa7.08□□□□□ -1.28
USP8-218ENST00000561330 TCAF2A6NFQ2 919 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 ZBTB7AO95365 584 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 TSPAN15O95858 294 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 C6orf222P0C671 652 aaPredicted RBP7.07□□□□□ -1.28
USP8-218ENST00000561330 RAP1GAPP47736 663 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 SLC6A11P48066 632 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 ZNF200P98182 395 aaPredicted RBP7.07□□□□□ -1.28
USP8-218ENST00000561330 ATG14Q6ZNE5 492 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 MZB1Q8WU39 189 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 SEC14L1Q92503 715 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 TSPAN17Q96FV3 270 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 ALG1Q9BT22 464 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 EPB41L1Q9H4G0 881 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 GCM1Q9NP62 436 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 SIT1Q9Y3P8 196 aa7.07□□□□□ -1.28
USP8-218ENST00000561330 N4BP3O15049 544 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 DGKIO75912 1065 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 C1QTNF9P0C862 333 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 MED14OSP0DP75 135 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 NAT1P18440 290 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 GRK2P25098 689 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 GRK3P35626 688 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 CDR1P51861 262 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 TARBP2Q15633 366 aaKnown RBP7.06□□□□□ -1.28
USP8-218ENST00000561330 CHRNA2Q15822 529 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 ZNF124Q15973 351 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 MTDHQ86UE4 582 aaKnown RBP7.06□□□□□ -1.28
USP8-218ENST00000561330 ALG3Q92685 438 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 JAM3Q9BX67 310 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 PPARGC1AQ9UBK2 798 aaKnown RBP7.06□□□□□ -1.28
USP8-218ENST00000561330 NDOR1Q9UHB4 597 aa7.06□□□□□ -1.28
USP8-218ENST00000561330 SGSM2O43147 1006 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 EFCAB14O75071 495 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 KRT1P04264 644 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 APPP05067 770 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 EPHB3P54753 998 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 NCKAP1LP55160 1127 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 GUCY1A3Q02108 690 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 SQSTM1Q13501 440 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 BCAS3Q9H6U6 928 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 SMG5Q9UPR3 1016 aaKnown RBP7.05□□□□□ -1.28
USP8-218ENST00000561330 PCDHA5Q9Y5H7 936 aa7.05□□□□□ -1.28
USP8-218ENST00000561330 FAM47E-STBD1D6RA91 191 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 HGSO14964 777 aaPredicted RBP7.04□□□□□ -1.28
USP8-218ENST00000561330 SOD2P04179 222 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 PFKLP17858 780 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 PAK1Q13153 545 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 MILR1Q7Z6M3 343 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
USP8-218ENST00000561330 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP8-218ENST00000561330 RNPC3Q96LT9 517 aaKnown RBP7.04□□□□□ -1.28
USP8-218ENST00000561330 KCNJ15Q99712 375 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 MRPL4Q9BYD3 311 aaKnown RBP7.04□□□□□ -1.28
USP8-218ENST00000561330 KANSL2Q9H9L4 492 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 PALD1Q9ULE6 856 aa7.04□□□□□ -1.28
USP8-218ENST00000561330 IRS2Q9Y4H2 1338 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 KRIT1O00522 736 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 GNAT1P11488 350 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 NCAM1P13591 858 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 PMLP29590 882 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 SPIRE1Q08AE8 756 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 STEAP3Q658P3 488 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 IGDCC3Q8IVU1 814 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 SIGLEC10Q96LC7 697 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 KRTAP4-12Q9BQ66 201 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 RNF38Q9H0F5 515 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 IPPKQ9H8X2 491 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 SLC52A2Q9HAB3 445 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 NCOA5Q9HCD5 579 aaKnown RBP7.03□□□□□ -1.28
USP8-218ENST00000561330 CD320Q9NPF0 282 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 TMEM260Q9NX78 707 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 SFMBT1Q9UHJ3 866 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 PCDHA9Q9Y5H5 950 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 PCDHA8Q9Y5H6 950 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 IRAK3Q9Y616 596 aa7.03□□□□□ -1.28
USP8-218ENST00000561330 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.02□□□□□ -1.29
USP8-218ENST00000561330 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 BUB1BO60566 1050 aaPredicted RBP7.02□□□□□ -1.29
USP8-218ENST00000561330 MAFKO60675 156 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 CRTAMO95727 393 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 ASGR2P07307 311 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 FBLN1P23142 703 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 KCNA10Q16322 511 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 TRIM61Q5EBN2 209 aa7.02□□□□□ -1.29
USP8-218ENST00000561330 EMC4Q5J8M3 183 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms