RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 COPS2P61201 443 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 KRT80Q6KB66 452 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 RMDN2Q96LZ7 410 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 PNMA6EA0A0J9YXQ4 647 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 FOSP01100 380 aaPredicted RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 YWHAGP61981 247 aaKnown RBP eCLIP4□□□□□ -1.77
ATXN3-248ENST00000558190 SERPINI1Q99574 410 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 ADAM33Q9BZ11 813 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 EIF2B2P49770 351 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 LRIG3Q6UXM1 1119 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 TRIML1Q8N9V2 468 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 DDX28Q9NUL7 540 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 ZBTB21Q9ULJ3 1066 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 DUSP10Q9Y6W6 482 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 IL15P40933 162 aaPredicted RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 SCTRP47872 440 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 NR1H3Q13133 447 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 UNC5CLQ8IV45 518 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 XAGE2Q96GT9 111 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 PAWRQ96IZ0 340 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 NR1H4Q96RI1 486 aaPredicted RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 ATF2P15336 505 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 GPTP24298 496 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 GSTT1P30711 240 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 MAP3K7CLP57077 242 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 INF2Q27J81 1249 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 PREPLQ4J6C6 727 aaPredicted RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 ZC3H18Q86VM9 953 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 DDX17Q92841 729 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 RNF34Q969K3 372 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 TRPV6Q9H1D0 765 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 ZFP69BQ9UJL9 534 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 SERPINI2O75830 405 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 FAM107AO95990 144 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 H2AFXP16104 143 aaPredicted RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 DR1Q01658 176 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 OTUD4Q01804 1114 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 TBL3Q12788 808 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 CCDC103Q8IW40 242 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 TLK1Q9UKI8 766 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 GSNP06396 782 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 MYBL2P10244 700 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 STMN1P16949 149 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 THOC5Q13769 683 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 KPNB1Q14974 876 aaKnown RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 MARCH10Q8NA82 808 aaPredicted RBP4□□□□□ -1.77
ATXN3-248ENST00000558190 LINS1Q8NG48 757 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 FNBP1Q96RU3 617 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 CCT7Q99832 543 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 SNX25Q9H3E2 840 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 FBXL5Q9UKA1 691 aa4□□□□□ -1.77
ATXN3-248ENST00000558190 SEPT2Q15019 361 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 FLCNQ8NFG4 579 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MTRQ99707 1265 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ETAA1Q9NY74 926 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ARMCX3Q9UH62 379 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TRPC6Q9Y210 931 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SMCO2A6NFE2 343 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 AIM2O14862 343 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 KDM1AO60341 852 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SCYL2Q6P3W7 929 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 BTNL9Q6UXG8 535 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 DDI1Q8WTU0 396 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 GID8Q9NWU2 228 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 OATP04181 439 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CASP2P42575 452 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MTF1Q14872 753 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 BZW1Q7L1Q6 419 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ATL2Q8NHH9 583 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TMEM87BQ96K49 555 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MYL10Q9BUA6 226 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NEUROG2Q9H2A3 272 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 LZTS1Q9Y250 596 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NDUFB9Q9Y6M9 179 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 XPO1O14980 1071 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 OLFML1Q6UWY5 402 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NFATC2IPQ8NCF5 419 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 EDC3Q96F86 508 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 KRT3P12035 628 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 ARMC3Q5W041 872 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 LRRC34Q8IZ02 419 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 COMMD10Q9Y6G5 202 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 KITP10721 976 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CABP7Q86V35 215 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 CRLF3Q8IUI8 442 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 AP3B1O00203 1094 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 STX3Q13277 289 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 DCAF17Q5H9S7 520 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 COL23A1Q86Y22 540 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 MYOCDQ8IZQ8 938 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 DNAJC17Q9NVM6 304 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 AGTPBP1Q9UPW5 1226 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 STRN3Q13033 797 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 FAM81AQ8TBF8 368 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 AP2B1P63010 937 aa3.99□□□□□ -1.77
ATXN3-248ENST00000558190 NOP9Q86U38 636 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 TYW1Q9NV66 732 aaKnown RBP3.99□□□□□ -1.77
ATXN3-248ENST00000558190 EMILIN1Q9Y6C2 1016 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms