RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 ZBTB47Q9UFB7 747 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-221ENST00000556571 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 ZMYM6O95789 1325 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-221ENST00000556571 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 NBNO60934 754 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
ACTN1-221ENST00000556571 CKBP12277 381 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 IKBKEQ14164 716 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 STXBP2Q15833 593 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 CHST3Q7LGC8 479 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 MCF2L2Q86YR7 1114 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-221ENST00000556571 TAAR1Q96RJ0 339 aa13.92□□□□□ -0.18
ACTN1-221ENST00000556571 ABCB11O95342 1321 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 LINC01553A4QN01 128 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 PSEN2P49810 448 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 PTK7Q13308 1070 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 LAMC2Q13753 1193 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.18
ACTN1-221ENST00000556571 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-221ENST00000556571 FAM227BQ96M60 508 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 CRBNQ96SW2 442 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 RMDN3Q96TC7 470 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 UBA5Q9GZZ9 404 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 RNF41Q9H4P4 317 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-221ENST00000556571 UBE2ZQ9H832 354 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-221ENST00000556571 C11orf16Q9NQ32 467 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 HDAC6Q9UBN7 1215 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 DDX41Q9UJV9 622 aaKnown RBP13.91□□□□□ -0.18
ACTN1-221ENST00000556571 MTUS1Q9ULD2 1270 aa13.91□□□□□ -0.18
ACTN1-221ENST00000556571 TRIP12Q14669 1992 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-221ENST00000556571 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
ACTN1-221ENST00000556571 NT5C2P49902 561 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 HAND2P61296 217 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 CDC37Q16543 378 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-221ENST00000556571 LEXMQ3ZCV2 418 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 CCDC178Q5BJE1 867 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 ESR2Q92731 530 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 TANC1Q9C0D5 1861 aa13.9□□□□□ -0.18
ACTN1-221ENST00000556571 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 HAS3O00219 553 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 MFSD10Q14728 455 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 TCTN1Q2MV58 587 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
ACTN1-221ENST00000556571 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 ANKRD45Q5TZF3 282 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 ARHGEF16Q5VV41 709 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 FAM178BQ8IXR5 827 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 ADGRF4Q8IZF3 695 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 GJD3Q8N144 294 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 PPTC7Q8NI37 304 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
ACTN1-221ENST00000556571 CPVLQ9H3G5 476 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
ACTN1-221ENST00000556571 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 MRVI1Q9Y6F6 885 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 EMSYQ7Z589 1322 aa13.89□□□□□ -0.19
ACTN1-221ENST00000556571 PPFIA4O75335 1185 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 LGR5O75473 907 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 F2P00734 622 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 NR3C2P08235 984 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 KCNA5P22460 613 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 PDE1AP54750 535 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 FAM117BQ6P1L5 589 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 ZNF589Q86UQ0 364 aaPredicted RBP13.88□□□□□ -0.19
ACTN1-221ENST00000556571 FBXO11Q86XK2 927 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 TBC1D10CQ8IV04 446 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 DHX37Q8IY37 1157 aaKnown RBP13.88□□□□□ -0.19
ACTN1-221ENST00000556571 PNMA1Q8ND90 353 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 CTNNA3Q9UI47 895 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
ACTN1-221ENST00000556571 PRR33A8MZF0 331 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 AMHP03971 560 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 HOXD8P13378 290 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-221ENST00000556571 ALADP13716 330 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 EIF2AK2P19525 551 aaKnown RBP13.87□□□□□ -0.19
ACTN1-221ENST00000556571 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
ACTN1-221ENST00000556571 NMIQ13287 307 aaPredicted RBP13.87□□□□□ -0.19
ACTN1-221ENST00000556571 MBTPS1Q14703 1052 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 PTPROQ16827 1216 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 QRICH1Q2TAL8 776 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 PUS10Q3MIT2 529 aaKnown RBP13.87□□□□□ -0.19
ACTN1-221ENST00000556571 ASPRV1Q53RT3 343 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
ACTN1-221ENST00000556571 IQCA1Q86XH1 822 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms