RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TMEM260Q9NX78 707 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 UAP1Q16222 522 aaPredicted RBP19.05■□□□□ 0.64
PTPN21-208ENST00000556564 BANK1Q8NDB2 785 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 PSMB7Q99436 277 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 ABCC12Q96J65 1359 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 SYNJ2BP-COX16A0A087WUM0 186 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 GAP43P17677 238 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 STAT1P42224 750 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 PDE6CP51160 858 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 CBX1P83916 185 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 EXOC8Q8IYI6 725 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 NSMCE1Q8WV22 266 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 ZMYND15Q9H091 742 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 COX16Q9P0S2 106 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 TMEM63CQ9P1W3 806 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 POLR2FP61218 127 aaKnown RBP19.05■□□□□ 0.64
PTPN21-208ENST00000556564 PPP2R5DQ14738 602 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 CFAP58Q5T655 872 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 SAMD7Q7Z3H4 446 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 MYOZ2Q9NPC6 264 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 CDC42EP5Q6NZY7 148 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 GYS1P13807 737 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 TMED8Q6PL24 325 aaPredicted RBP19.05■□□□□ 0.64
PTPN21-208ENST00000556564 CCDC125Q86Z20 511 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 XPO4Q9C0E2 1151 aaKnown RBP19.05■□□□□ 0.64
PTPN21-208ENST00000556564 HERC5Q9UII4 1024 aaKnown RBP19.05■□□□□ 0.64
PTPN21-208ENST00000556564 ZKSCAN5Q9Y2L8 839 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 USP32Q8NFA0 1604 aa19.05■□□□□ 0.64
PTPN21-208ENST00000556564 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 FCER1AP12319 257 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 HOXD10P28358 340 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 LACTBP83111 547 aaPredicted RBP19.04■□□□□ 0.64
PTPN21-208ENST00000556564 FASTKD5Q7L8L6 764 aaKnown RBP19.04■□□□□ 0.64
PTPN21-208ENST00000556564 SLC16A10Q8TF71 515 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 OSBPL5Q9H0X9 879 aaPredicted RBP19.04■□□□□ 0.64
PTPN21-208ENST00000556564 STAM2O75886 525 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 PLCD4Q9BRC7 762 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 LY9Q9HBG7 655 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 SH3GLB2Q9NR46 395 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 HESX1Q9UBX0 185 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 MTRF1LQ9UGC7 380 aaKnown RBP19.04■□□□□ 0.64
PTPN21-208ENST00000556564 RNF187Q5TA31 235 aaPredicted RBP19.04■□□□□ 0.64
PTPN21-208ENST00000556564 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 MRRFQ96E11 262 aaKnown RBP19.04■□□□□ 0.64
PTPN21-208ENST00000556564 MAGEF1Q9HAY2 307 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 GJB4Q9NTQ9 266 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 PLA2G4BP0C869 781 aa19.04■□□□□ 0.64
PTPN21-208ENST00000556564 FLT1P17948 1338 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 CSF1RP07333 972 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 SELENOSQ9BQE4 189 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 NAP1L3Q99457 506 aaPredicted RBP19.03■□□□□ 0.64
PTPN21-208ENST00000556564 NAPGQ99747 312 aaPredicted RBP19.03■□□□□ 0.64
PTPN21-208ENST00000556564 XPOTO43592 962 aaKnown RBP19.03■□□□□ 0.64
PTPN21-208ENST00000556564 PLCG1P19174 1290 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 PDIA6Q15084 440 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 CCDC26Q8TAB7 109 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 CUEDC2Q9H467 287 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 PCDHB4Q9Y5E5 795 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 GRM4Q14833 912 aa19.03■□□□□ 0.64
PTPN21-208ENST00000556564 NR2F2P24468 414 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 TMTC1Q8IUR5 882 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 POLR3EQ9NVU0 708 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 STIM2Q9P246 746 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 TFAMQ00059 246 aaKnown RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 AP3B2Q13367 1082 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 KRT81Q14533 505 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 PIGOQ8TEQ8 1089 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 NDC80O14777 642 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 TOB2Q14106 344 aaPredicted RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 METTL23Q86XA0 190 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 PPANQ9NQ55 473 aaKnown RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 SFI1A8K8P3 1242 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 PFKFB3Q16875 520 aaPredicted RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 MFSD14CQ5VZR4 134 aa19.02■□□□□ 0.64
PTPN21-208ENST00000556564 UBLCP1Q8WVY7 318 aaPredicted RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 CNOT6LQ96LI5 555 aaKnown RBP19.02■□□□□ 0.64
PTPN21-208ENST00000556564 PTPROQ16827 1216 aa19.02■□□□□ 0.63
PTPN21-208ENST00000556564 METTL14Q9HCE5 456 aaKnown RBP19.02■□□□□ 0.63
PTPN21-208ENST00000556564 SLU7O95391 586 aaKnown RBP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 DDIT3P35638 169 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 SPECC1LQ69YQ0 1117 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 NSUN6Q8TEA1 469 aaKnown RBP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 FANCLQ9NW38 375 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 CEP104O60308 925 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 CELF2O95319 508 aaKnown RBP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 KIAA1841Q6NSI8 718 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 ZNF365Q70YC5 407 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 SND1Q7KZF4 910 aaKnown RBP eCLIP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 MTFR1LQ9H019 292 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 TLDC2A0PJX2 215 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 NUCKS1Q9H1E3 243 aaKnown RBP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 NFX1Q12986 1120 aaKnown RBP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 TRIML1Q8N9V2 468 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 TRIM31Q9BZY9 425 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 SNX25Q9H3E2 840 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 PSMC2P35998 433 aaKnown RBP19.01■□□□□ 0.63
PTPN21-208ENST00000556564 RAET1EQ8TD07 263 aa19.01■□□□□ 0.63
PTPN21-208ENST00000556564 ACAD9Q9H845 621 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms