RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 XIRP2A4UGR9 3374 aa11.78□□□□□ -0.52
HNRNPC-218ENST00000555215 ABCB11O95342 1321 aa11.78□□□□□ -0.52
HNRNPC-218ENST00000555215 TRANK1O15050 2925 aa11.78□□□□□ -0.52
HNRNPC-218ENST00000555215 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-218ENST00000555215 LCHNA4D1U4 455 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 KPNA6O60684 536 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 CFBP00751 764 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 GH1P01241 217 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 NR3C2P08235 984 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 PARP1P09874 1014 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 HOXA13P31271 388 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 SP2Q02086 613 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 PTH1RQ03431 593 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 TAP1Q03518 808 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 ASPRV1Q53RT3 343 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 TMEM67Q5HYA8 995 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 TRAF7Q6Q0C0 670 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 PXMP2Q9NR77 195 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 THEGQ9P2T0 379 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 MAD2L2Q9UI95 211 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 TELO2Q9Y4R8 837 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
HNRNPC-218ENST00000555215 LAMA4Q16363 1823 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 PTPRSQ13332 1948 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 PALM3A6NDB9 673 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 TNFRSF10AO00220 468 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 CYTH3O43739 400 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 NBNO60934 754 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 PFKMP08237 780 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 ZNF286BP0CG31 522 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 HSD17B4P51659 736 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 DEFB103AP81534 67 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 MBTPS1Q14703 1052 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 STXBP2Q15833 593 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 TRIM71Q2Q1W2 868 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 BRDTQ58F21 947 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 HERC6Q8IVU3 1022 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 ADAMTS19Q8TE59 1207 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 ALG1Q9BT22 464 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 OSBPL7Q9BZF2 842 aa11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 MRPL11Q9Y3B7 192 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-218ENST00000555215 KLRF2D3W0D1 207 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 HAS3O00219 553 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 LPXNO60711 386 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 BMP1P13497 986 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 PSEN2P49810 448 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 KCNQ1P51787 676 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 MRPS5P82675 430 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 GHRHRQ02643 423 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 IMMTQ16891 758 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 CCDC178Q5BJE1 867 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 ARHGEF16Q5VV41 709 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 STOX1Q6ZVD7 989 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 SESTD1Q86VW0 696 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 ARNTL2Q8WYA1 636 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 PIGSQ96S52 555 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 IWS1Q96ST2 819 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 PDCD2LQ9BRP1 358 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 GTF2IRD1Q9UHL9 959 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 NOD1Q9Y239 953 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 RAD50Q92878 1312 aa11.75□□□□□ -0.53
HNRNPC-218ENST00000555215 MYH6P13533 1939 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 CYP21A2P08686 494 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 CKBP12277 381 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 POU3F3P20264 500 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 RFC2P35250 354 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 WDR5P61964 334 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 BFSP2Q13515 415 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 AAMPQ13685 434 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 LRRC8DQ7L1W4 858 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 EMID1Q96A84 441 aaPredicted RBP11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 SLC9A7Q96T83 725 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 UBAC1Q9BSL1 405 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 AMNQ9BXJ7 453 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 KRT23Q9C075 422 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
HNRNPC-218ENST00000555215 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms