RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MRE11P49959 708 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
PABPN1-203ENST00000553960 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
PABPN1-203ENST00000553960 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
PABPN1-203ENST00000553960 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CCDC174Q6PII3 467 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 RNF207Q6ZRF8 634 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 RDM1Q8NG50 284 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 NSUN6Q8TEA1 469 aaKnown RBP12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 INPP4AQ96PE3 977 aaPredicted RBP12.29□□□□□ -0.44
PABPN1-203ENST00000553960 GSDMAQ96QA5 445 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 MXRA8Q9BRK3 442 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 SDF4Q9BRK5 362 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 NT5C3AQ9H0P0 336 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 DISC1Q9NRI5 854 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 RBPJLQ9UBG7 517 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 CCDC39Q9UFE4 941 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 ZNF236Q9UL36 1845 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 LCTP09848 1927 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 LOXHD1Q8IVV2 1947 aa12.29□□□□□ -0.44
PABPN1-203ENST00000553960 MANSC4A6NHS7 340 aaPredicted RBP12.28□□□□□ -0.44
PABPN1-203ENST00000553960 STRNO43815 780 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 ALAS1P13196 640 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 ICAM3P32942 547 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 UBA7P41226 1012 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 SNAP25P60880 206 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 FSTL1Q12841 308 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 TMEM119Q4V9L6 283 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 COBLL1Q53SF7 1204 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 NAALADL2Q58DX5 795 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 MUM1L1Q5H9M0 696 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 FOXR2Q6PJQ5 311 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 MOB2Q70IA6 237 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 SAPCD2Q86UD0 394 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
PABPN1-203ENST00000553960 SMC1BQ8NDV3 1235 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 NEK9Q8TD19 979 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 TBC1D5Q92609 795 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 SENP7Q9BQF6 1050 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 PDCD2LQ9BRP1 358 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
PABPN1-203ENST00000553960 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
PABPN1-203ENST00000553960 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
PABPN1-203ENST00000553960 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
PABPN1-203ENST00000553960 JADE2Q9NQC1 790 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 PXMP2Q9NR77 195 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 KDM3AQ9Y4C1 1321 aa12.28□□□□□ -0.44
PABPN1-203ENST00000553960 SYCE3A1L190 88 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 B4DLN1 442 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 KIF3CO14782 793 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 POLR2DO15514 142 aaKnown RBP12.27□□□□□ -0.45
PABPN1-203ENST00000553960 TGFB3P10600 412 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 ATP2B1P20020 1258 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 RPA1P27694 616 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.45
PABPN1-203ENST00000553960 CCNA1P78396 465 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 DGKZQ13574 1117 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 PRKG1Q13976 671 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 PGM5Q15124 567 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.45
PABPN1-203ENST00000553960 USP49Q70CQ1 688 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
PABPN1-203ENST00000553960 GAS2L3Q86XJ1 694 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 FAM133AQ8N9E0 248 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 CNNM3Q8NE01 707 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 BRI3BPQ8WY22 251 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 TSPY26PQ9H489 355 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 TBC1D22BQ9NU19 505 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 ANO10Q9NW15 660 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 BTBD7Q9P203 1132 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 ADD3Q9UEY8 706 aaKnown RBP12.27□□□□□ -0.45
PABPN1-203ENST00000553960 LRWD1Q9UFC0 647 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 VAV3Q9UKW4 847 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 ADGRA2Q96PE1 1338 aa12.27□□□□□ -0.45
PABPN1-203ENST00000553960 A0A087X0B3 334 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 GOLGA6L3A6NEY3 463 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 MSH4O15457 936 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 TOMM70O94826 608 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 LYPLA2O95372 231 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 SLC10A3P09131 477 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 XRCC6P12956 609 aaKnown RBP eCLIP12.26□□□□□ -0.45
PABPN1-203ENST00000553960 MRPS9P82933 396 aaKnown RBP12.26□□□□□ -0.45
PABPN1-203ENST00000553960 KCNB1Q14721 858 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 POSTNQ15063 836 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 HAUS3Q68CZ6 603 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 GADL1Q6ZQY3 521 aa12.26□□□□□ -0.45
PABPN1-203ENST00000553960 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms