RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 USP17L21D6R901 530 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 UPP2O95045 317 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 ARIH2O95376 493 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 SP100P23497 879 aaPredicted RBP16.2■□□□□ 0.18
SNRPF-203ENST00000551316 DNAJB1P25685 340 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 NUBP1P53384 320 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 C12orf60Q5U649 245 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 RASGRP2Q7LDG7 609 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 CCDC155Q8N6L0 562 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 CCDC17Q96LX7 622 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
SNRPF-203ENST00000551316 DLL3Q9NYJ7 618 aa16.2■□□□□ 0.18
SNRPF-203ENST00000551316 KIAA1217Q5T5P2 1943 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.19■□□□□ 0.18
SNRPF-203ENST00000551316 NCK2O43639 380 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 IGSF3O75054 1194 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 AMHP03971 560 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 OAZ1P54368 228 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
SNRPF-203ENST00000551316 G3BP1Q13283 466 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNRPF-203ENST00000551316 CHMP4CQ96CF2 233 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 PHF7Q9BWX1 381 aaPredicted RBP16.19■□□□□ 0.18
SNRPF-203ENST00000551316 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
SNRPF-203ENST00000551316 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 GPR179Q6PRD1 2367 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 C5orf67F2Z3F1 127 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 EFCAB14O75071 495 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 BRD1O95696 1058 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 ALAS1P13196 640 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 COASYQ13057 564 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 PUM1Q14671 1186 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNRPF-203ENST00000551316 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 LRRC47Q8N1G4 583 aaKnown RBP16.18■□□□□ 0.18
SNRPF-203ENST00000551316 COL26A1Q96A83 441 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 CDH22Q9UJ99 828 aa16.18■□□□□ 0.18
SNRPF-203ENST00000551316 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
SNRPF-203ENST00000551316 ALDH5A1P51649 535 aaPredicted RBP16.17■□□□□ 0.18
SNRPF-203ENST00000551316 CWF19L1Q69YN2 538 aaKnown RBP16.17■□□□□ 0.18
SNRPF-203ENST00000551316 SESTD1Q86VW0 696 aa16.17■□□□□ 0.18
SNRPF-203ENST00000551316 VN1R2Q8NFZ6 395 aa16.17■□□□□ 0.18
SNRPF-203ENST00000551316 EAF2Q96CJ1 260 aaPredicted RBP16.17■□□□□ 0.18
SNRPF-203ENST00000551316 TRERF1Q96PN7 1200 aa16.17■□□□□ 0.18
SNRPF-203ENST00000551316 NOB1Q9ULX3 412 aaKnown RBP16.17■□□□□ 0.18
SNRPF-203ENST00000551316 MMP1P03956 469 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 RASA1P20936 1047 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 NSMFQ6X4W1 530 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 STK11IPQ8N1F8 1099 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 SUSD6Q92537 303 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 TOP1MTQ969P6 601 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 RC3H2Q9HBD1 1191 aaKnown RBP16.16■□□□□ 0.18
SNRPF-203ENST00000551316 HDAC6Q9UBN7 1215 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 GTF2IRD1Q9UHL9 959 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
SNRPF-203ENST00000551316 IGKV6D-41A0A0C4DH26 115 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 MBD4O95243 580 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 PLEKHG4Q58EX7 1191 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 DCLK2Q8N568 766 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 LMAN2LQ9H0V9 348 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 FEM1BQ9UK73 627 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
SNRPF-203ENST00000551316 MMP3P08254 477 aa16.14■□□□□ 0.17
SNRPF-203ENST00000551316 PPP2R5BQ15173 497 aa16.14■□□□□ 0.17
SNRPF-203ENST00000551316 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
SNRPF-203ENST00000551316 EFHBQ8N7U6 833 aa16.14■□□□□ 0.17
SNRPF-203ENST00000551316 KREMEN2Q8NCW0 462 aa16.14■□□□□ 0.17
SNRPF-203ENST00000551316 NYAP2Q9P242 653 aa16.14■□□□□ 0.17
SNRPF-203ENST00000551316 PI15O43692 258 aa16.13■□□□□ 0.17
SNRPF-203ENST00000551316 PARNO95453 639 aaKnown RBP16.13■□□□□ 0.17
SNRPF-203ENST00000551316 BMPR1AP36894 532 aa16.13■□□□□ 0.17
SNRPF-203ENST00000551316 NRIP1P48552 1158 aa16.13■□□□□ 0.17
SNRPF-203ENST00000551316 ASTLQ6HA08 431 aaPredicted RBP16.13■□□□□ 0.17
SNRPF-203ENST00000551316 RBM23Q86U06 439 aaKnown RBP16.13■□□□□ 0.17
SNRPF-203ENST00000551316 AFG1LQ8WV93 481 aa16.13■□□□□ 0.17
SNRPF-203ENST00000551316 C11orf84Q9BUA3 381 aaPredicted RBP16.13■□□□□ 0.17
SNRPF-203ENST00000551316 IFIH1Q9BYX4 1025 aaKnown RBP16.13■□□□□ 0.17
SNRPF-203ENST00000551316 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
SNRPF-203ENST00000551316 R4GN57 208 aa16.13■□□□□ 0.17
SNRPF-203ENST00000551316 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
SNRPF-203ENST00000551316 NFIBO00712 420 aa16.12■□□□□ 0.17
SNRPF-203ENST00000551316 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
SNRPF-203ENST00000551316 RSPO4Q2I0M5 234 aaPredicted RBP16.12■□□□□ 0.17
SNRPF-203ENST00000551316 CTR9Q6PD62 1173 aa16.12■□□□□ 0.17
SNRPF-203ENST00000551316 FIBCD1Q8N539 461 aa16.12■□□□□ 0.17
SNRPF-203ENST00000551316 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
SNRPF-203ENST00000551316 GCN1Q92616 2671 aaKnown RBP16.11■□□□□ 0.17
SNRPF-203ENST00000551316 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 PTK7Q13308 1070 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 POLA2Q14181 598 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 ANGPT1Q15389 498 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 ZBTB33Q86T24 672 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 CRIPAKQ8N1N5 446 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 ALG1Q9BT22 464 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
SNRPF-203ENST00000551316 DENND4AQ7Z401 1863 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 RAD50Q92878 1312 aa16.11■□□□□ 0.17
SNRPF-203ENST00000551316 KPNA6O60684 536 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms