RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CRKLP46109 303 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 CYP4A11Q02928 519 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 MECOMQ03112 1051 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 TAOK1Q7L7X3 1001 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 VSIG1Q86XK7 387 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 A0A1W2PQC6 194 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 VPS41P49754 854 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 CYP2J2P51589 502 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 NGLY1Q96IV0 654 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 NAP1L4Q99733 375 aaKnown RBP11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 PSTPIP2Q9H939 334 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 SNX12Q9UMY4 172 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.62
SMARCC2-209ENST00000550164 GUCY1A3Q02108 690 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 PRR16Q569H4 304 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 FBXW10Q5XX13 1052 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 ANKRD40Q6AI12 368 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 PHF20Q9BVI0 1012 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 IKBKGQ9Y6K9 419 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 COL15A1P39059 1388 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 TARSL2A2RTX5 802 aaKnown RBP11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 SERPING1P05155 500 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 ZNF18P17022 549 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 RCAN1P53805 252 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 PLTPP55058 493 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 ATP11AP98196 1134 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 PABPC4Q13310 644 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 DIXDC1Q155Q3 683 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 ADSSL1Q8N142 457 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 KANSL2Q9H9L4 492 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 TMEM94Q12767 1356 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 PRDX5P30044 214 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 POTEMA6NI47 508 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 KLK7P49862 253 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 IRAK1P51617 712 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 NTRK3Q16288 839 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 MSANTD4Q8NCY6 345 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 MS4A14Q96JA4 679 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 MTA3Q9BTC8 594 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 TRIM7Q9C029 511 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
SMARCC2-209ENST00000550164 A0A0U1RQJ8 604 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 KRT14P02533 472 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 KRT5P13647 590 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 SLCO1A2P46721 670 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 MFSD14BQ5SR56 506 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 HIBCHQ6NVY1 386 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 ZNF365Q70YC5 407 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 TPH2Q8IWU9 490 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 CD2APQ9Y5K6 639 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 DUSP10Q9Y6W6 482 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 PCK1P35558 622 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 SIK1P57059 783 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 LRRC31Q6UY01 552 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 SLC44A5Q8NCS7 719 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 DDX12PQ92771 950 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 KIFC2Q96AC6 838 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 ZNF804BA4D1E1 1349 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 CCDC169A6NNP5 214 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 NEBLO76041 1014 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 ATP5DP30049 168 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 BTDP43251 543 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 KCNQ4P56696 695 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 ERFEQ4G0M1 354 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 ALKBH5Q6P6C2 394 aaKnown RBP11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 FMNL3Q8IVF7 1028 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 CCDC63Q8NA47 563 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 CCDC197Q8NCU1 140 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 INTS13Q9NVM9 706 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 SLAIN2Q9P270 581 aa11.19□□□□□ -0.62
SMARCC2-209ENST00000550164 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 PSMD14O00487 310 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 BMP6P22004 513 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 LRRC63Q05C16 580 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 STK4Q13043 487 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 STAG2Q8N3U4 1231 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 CNBD1Q8NA66 436 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 VEZTQ9HBM0 779 aa11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 DCP1AQ9NPI6 582 aaPredicted RBP11.18□□□□□ -0.62
SMARCC2-209ENST00000550164 KCND1Q9NSA2 647 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms