RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 KIF3AQ9Y496 699 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 ASB14A6NK59 587 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 FAM86B1E9PN63 330 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 H3BQV1 296 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 STX6O43752 255 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 HMGCRP04035 888 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 FAM86B2P0C5J1 330 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 PRKAR2AP13861 404 aaKnown RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 SEMA3FQ13275 785 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 PCNX4Q63HM2 1172 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 TAPT1Q6NXT6 567 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 LENG1Q96BZ8 264 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 IWS1Q96ST2 819 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 FOXP1Q9H334 677 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-217ENST00000545738 DOCK5Q9H7D0 1870 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 ZDHHC9Q9Y397 364 aa18.6■□□□□ 0.57
LIMS2-217ENST00000545738 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-217ENST00000545738 ARIH2O95376 493 aa18.59■□□□□ 0.57
LIMS2-217ENST00000545738 CCND3P30281 292 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-217ENST00000545738 MTFR1Q15390 333 aa18.59■□□□□ 0.57
LIMS2-217ENST00000545738 NOSTRINQ8IVI9 506 aa18.59■□□□□ 0.57
LIMS2-217ENST00000545738 MSL3Q8N5Y2 521 aaKnown RBP18.59■□□□□ 0.57
LIMS2-217ENST00000545738 IGLV3-22A0A075B6J6 115 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 TDP2O95551 362 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 MYCP01106 439 aaPredicted RBP18.58■□□□□ 0.57
LIMS2-217ENST00000545738 PDE4DQ08499 809 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 NBR1Q14596 966 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 NONOQ15233 471 aaKnown RBP eCLIP18.58■□□□□ 0.57
LIMS2-217ENST00000545738 MCTP1Q6DN14 999 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 KRT25Q7Z3Z0 450 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 LENG9Q96B70 501 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 BCAS3Q9H6U6 928 aa18.58■□□□□ 0.57
LIMS2-217ENST00000545738 LOC102724159A0A0B4J2E5 919 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 CCDC194A0A1B0GVG4 234 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 CYP3A4P08684 503 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 PDCP20941 246 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 CCND2P30279 289 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 TOB1P50616 345 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 ACVR2BQ13705 512 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 PWP2Q15269 919 aaKnown RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 STXBP2Q15833 593 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 SLC9C1Q4G0N8 1177 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 GJC2Q5T442 439 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 FOXD4L5Q5VV16 416 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 FAM173BQ6P4H8 233 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 FOXD4L4Q8WXT5 416 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 INPP4AQ96PE3 977 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 WDR11Q9BZH6 1224 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 BRMS1Q9HCU9 246 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 ZHX1Q9UKY1 873 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 UBIAD1Q9Y5Z9 338 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 ADCYAP1R1P41586 468 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 RESTQ13127 1097 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 SAFBQ15424 915 aaKnown RBP eCLIP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 PKN2Q16513 984 aaKnown RBP18.57■□□□□ 0.56
LIMS2-217ENST00000545738 UIMC1Q96RL1 719 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 ABHD16BQ9H3Z7 469 aa18.57■□□□□ 0.56
LIMS2-217ENST00000545738 SLC37A4O43826 429 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 EIF3JO75822 258 aaKnown RBP18.56■□□□□ 0.56
LIMS2-217ENST00000545738 SP2Q02086 613 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 CCDC144BQ3MJ40 725 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 MFSD14CQ5VZR4 134 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 ANO1Q5XXA6 986 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 SEPT14Q6ZU15 432 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 TRMT44Q8IYL2 757 aaKnown RBP18.56■□□□□ 0.56
LIMS2-217ENST00000545738 ZNF333Q96JL9 665 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 TELO2Q9Y4R8 837 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 FRMPD3Q5JV73 1810 aa18.56■□□□□ 0.56
LIMS2-217ENST00000545738 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
LIMS2-217ENST00000545738 ARP10275 920 aa18.55■□□□□ 0.56
LIMS2-217ENST00000545738 CIITAP33076 1130 aa18.55■□□□□ 0.56
LIMS2-217ENST00000545738 IRX5P78411 483 aaPredicted RBP18.55■□□□□ 0.56
LIMS2-217ENST00000545738 LETM2Q2VYF4 491 aa18.55■□□□□ 0.56
LIMS2-217ENST00000545738 GJA10Q969M2 543 aa18.55■□□□□ 0.56
LIMS2-217ENST00000545738 UNC93B1Q9H1C4 597 aa18.55■□□□□ 0.56
LIMS2-217ENST00000545738 RBM47A0AV96 593 aaKnown RBP18.54■□□□□ 0.56
LIMS2-217ENST00000545738 ATP9AO75110 1047 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 CEP55Q53EZ4 464 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 MCTP2Q6DN12 878 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 CCDC62Q6P9F0 684 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 NEK8Q86SG6 692 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 COPS5Q92905 334 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 ARMC5Q96C12 935 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 CHAMP1Q96JM3 812 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 MXRA8Q9BRK3 442 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 CNPY2Q9Y2B0 182 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 KIAA0100Q14667 2235 aaKnown RBP18.54■□□□□ 0.56
LIMS2-217ENST00000545738 MEIS1O00470 390 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 SMPD1P17405 629 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 ATP2B1P20020 1258 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 USP11P51784 963 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 LY6KQ17RY6 165 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 MBOAT7Q96N66 472 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 JADE2Q9NQC1 790 aa18.54■□□□□ 0.56
LIMS2-217ENST00000545738 CYP3A7-CYP3A51PA0A087WV96 503 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 BRD1O95696 1058 aa18.53■□□□□ 0.56
LIMS2-217ENST00000545738 CYP3A7P24462 503 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms