RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 PGM5Q15124 567 aa21.69■■□□□ 1.06
TDG-208ENST00000544060 NBPF20Q3BBV1 942 aa21.69■■□□□ 1.06
TDG-208ENST00000544060 AFG1LQ8WV93 481 aa21.69■■□□□ 1.06
TDG-208ENST00000544060 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.69■■□□□ 1.06
TDG-208ENST00000544060 LRRC2Q9BYS8 371 aa21.69■■□□□ 1.06
TDG-208ENST00000544060 PLEKHA8P1O95397 391 aa21.68■■□□□ 1.06
TDG-208ENST00000544060 MMP3P08254 477 aa21.68■■□□□ 1.06
TDG-208ENST00000544060 SMARCA1P28370 1054 aa21.68■■□□□ 1.06
TDG-208ENST00000544060 CCND2P30279 289 aa21.68■■□□□ 1.06
TDG-208ENST00000544060 PSRC1Q6PGN9 363 aaPredicted RBP21.68■■□□□ 1.06
TDG-208ENST00000544060 FAM161BQ96MY7 647 aa21.68■■□□□ 1.06
TDG-208ENST00000544060 NEK1Q96PY6 1258 aa21.68■■□□□ 1.06
TDG-208ENST00000544060 NOC4LQ9BVI4 516 aaKnown RBP21.68■■□□□ 1.06
TDG-208ENST00000544060 TRMT13Q9NUP7 481 aaKnown RBP21.68■■□□□ 1.06
TDG-208ENST00000544060 DDX41Q9UJV9 622 aaKnown RBP21.68■■□□□ 1.06
TDG-208ENST00000544060 SCN10AQ9Y5Y9 1956 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 UMODL1Q5DID0 1318 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 NEFLP07196 543 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 ACRP10323 421 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 CCL23P55773 120 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 COL9A3Q14050 684 aaPredicted RBP21.67■■□□□ 1.06
TDG-208ENST00000544060 NFRKBQ6P4R8 1299 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 KCNV1Q6PIU1 500 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 SYNE3Q6ZMZ3 975 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 CUL5Q93034 780 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 IL23AQ9NPF7 189 aa21.67■■□□□ 1.06
TDG-208ENST00000544060 CASTP20810 708 aaKnown RBP21.66■■□□□ 1.06
TDG-208ENST00000544060 LAMC2Q13753 1193 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 DGKDQ16760 1214 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 TMEM240Q5SV17 173 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 VSIG10LQ86VR7 867 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 MICU3Q86XE3 530 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 DHX37Q8IY37 1157 aaKnown RBP21.66■■□□□ 1.06
TDG-208ENST00000544060 SRBD1Q8N5C6 995 aaKnown RBP21.66■■□□□ 1.06
TDG-208ENST00000544060 IL31RAQ8NI17 732 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 SMARCC2Q8TAQ2 1214 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 NOD1Q9Y239 953 aa21.66■■□□□ 1.06
TDG-208ENST00000544060 CYP2C9P11712 490 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 PTPN11Q06124 597 aaPredicted RBP21.65■■□□□ 1.06
TDG-208ENST00000544060 KRT32Q14532 448 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 ZNF365Q70YC5 407 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 C16orf59Q7L2K0 433 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 SGMS1Q86VZ5 419 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 CMTR1Q8N1G2 835 aaKnown RBP21.65■■□□□ 1.06
TDG-208ENST00000544060 PPP1R13LQ8WUF5 828 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 EMID1Q96A84 441 aaPredicted RBP21.65■■□□□ 1.06
TDG-208ENST00000544060 STXBP5LQ9Y2K9 1186 aa21.65■■□□□ 1.06
TDG-208ENST00000544060 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.64■■□□□ 1.05
TDG-208ENST00000544060 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.64■■□□□ 1.05
TDG-208ENST00000544060 FANCBQ8NB91 859 aa21.64■■□□□ 1.05
TDG-208ENST00000544060 WNT8AQ9H1J5 351 aa21.64■■□□□ 1.05
TDG-208ENST00000544060 MTIF3Q9H2K0 278 aaKnown RBP21.64■■□□□ 1.05
TDG-208ENST00000544060 SORBS3O60504 671 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 RGS20O76081 388 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 FGBP02675 491 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 GNPTABQ3T906 1256 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 TMTC3Q6ZXV5 915 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 DHX32Q7L7V1 743 aaKnown RBP21.63■■□□□ 1.05
TDG-208ENST00000544060 RPUSD2Q8IZ73 545 aaKnown RBP21.63■■□□□ 1.05
TDG-208ENST00000544060 CCDC82Q8N4S0 544 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 PPTC7Q8NI37 304 aa21.63■■□□□ 1.05
TDG-208ENST00000544060 ZFP91Q96JP5 570 aaPredicted RBP21.63■■□□□ 1.05
TDG-208ENST00000544060 STAM2O75886 525 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 GGPS1O95749 300 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 TGFB3P10600 412 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 TSGA10IPQ3SY00 556 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 USP17L6PQ6QN14 398 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 RASEFQ8IZ41 740 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 SCLYQ96I15 445 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 TCEANC2Q96MN5 208 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 SPATA33Q96N06 139 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 GUCD1Q96NT3 240 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 KATNAL1Q9BW62 490 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 MYH7BA7E2Y1 1941 aa21.62■■□□□ 1.05
TDG-208ENST00000544060 FRMPD4Q14CM0 1322 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 HMGB1P09429 215 aaKnown RBP21.61■■□□□ 1.05
TDG-208ENST00000544060 ZNF286BP0CG31 522 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 UBA1P22314 1058 aaKnown RBP21.61■■□□□ 1.05
TDG-208ENST00000544060 PTGISQ16647 500 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 ADCK5Q3MIX3 580 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 CELF3Q5SZQ8 465 aaKnown RBP21.61■■□□□ 1.05
TDG-208ENST00000544060 MYSM1Q5VVJ2 828 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 APOA5Q6Q788 366 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 RETREG2Q8NC44 543 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 HERVK_113Q902F9 699 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 SEMA6BQ9H3T3 888 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 MLXIPQ9HAP2 919 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 RBM28Q9NW13 759 aaKnown RBP21.61■■□□□ 1.05
TDG-208ENST00000544060 COL6A3P12111 3177 aa21.61■■□□□ 1.05
TDG-208ENST00000544060 TMEM265A0A087WTH1 108 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 hCG_1642624A0A1W2PR95 340 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 PIK3CDO00329 1044 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 DNAJB2P25686 324 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 PSEN2P49810 448 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 FGD1P98174 961 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 EXOSC10Q01780 885 aaKnown RBP21.6■■□□□ 1.05
TDG-208ENST00000544060 BFSP2Q13515 415 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 RASIP1Q5U651 963 aa21.6■■□□□ 1.05
TDG-208ENST00000544060 OTOP2Q7RTS6 562 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms