RNA–Protein interactions for RNA: ENST00000542611.5

NBR1-202, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2 BASIC

Gene NBR1, Length 2,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-202ENST00000542611 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.41□□□□□ -0.26
NBR1-202ENST00000542611 SCN9AQ15858 1988 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 USP17L3A6NCW0 530 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 USP17L4A6NCW7 530 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 SMNDC1O75940 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
NBR1-202ENST00000542611 CMA1P23946 247 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 PICALMQ13492 652 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 PNOCQ13519 176 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 USP17L1Q7RTZ2 530 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 MYCBPAPQ8TBZ2 947 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 CCT8L2Q96SF2 557 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 POLR3EQ9NVU0 708 aa13.4□□□□□ -0.26
NBR1-202ENST00000542611 MGRN1O60291 552 aa13.4□□□□□ -0.27
NBR1-202ENST00000542611 NR1I3Q14994 352 aa13.4□□□□□ -0.27
NBR1-202ENST00000542611 SLF2Q8IX21 1173 aa13.4□□□□□ -0.27
NBR1-202ENST00000542611 NSMCE1Q8WV22 266 aa13.4□□□□□ -0.27
NBR1-202ENST00000542611 WASF1Q92558 559 aa13.4□□□□□ -0.27
NBR1-202ENST00000542611 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.27
NBR1-202ENST00000542611 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.27
NBR1-202ENST00000542611 EBF2Q9HAK2 575 aa13.4□□□□□ -0.27
NBR1-202ENST00000542611 HOOK1Q9UJC3 728 aaKnown RBP13.4□□□□□ -0.27
NBR1-202ENST00000542611 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 DNM1LO00429 736 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 PES1O00541 588 aaKnown RBP13.39□□□□□ -0.27
NBR1-202ENST00000542611 OPLAHO14841 1288 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 MMP1P03956 469 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 RBL2Q08999 1139 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 PTGISQ16647 500 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 SND1Q7KZF4 910 aaKnown RBP eCLIP13.39□□□□□ -0.27
NBR1-202ENST00000542611 NLRP14Q86W24 1093 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 DDAH1O94760 285 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
NBR1-202ENST00000542611 PLCG2P16885 1265 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 FUT2Q10981 343 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 SPRED3Q2MJR0 410 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 ANO1Q5XXA6 986 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 KDM7AQ6ZMT4 941 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
NBR1-202ENST00000542611 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
NBR1-202ENST00000542611 SPAG5Q96R06 1193 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
NBR1-202ENST00000542611 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
NBR1-202ENST00000542611 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 AHCYL1O43865 530 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 FESP07332 822 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 SYKP43405 635 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 GUCY1A3Q02108 690 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 NR5A1Q13285 461 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 XRCC4Q13426 336 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 STYK1Q6J9G0 422 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 SH2D3CQ8N5H7 860 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 EYA3Q99504 573 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 VPS54Q9P1Q0 977 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 NFE2L3Q9Y4A8 694 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 PPP1R37O75864 691 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 CALM1P0DP23 149 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 CALM2P0DP24 149 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 CALM3P0DP25 149 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 RASA1P20936 1047 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
NBR1-202ENST00000542611 SEC24CP53992 1094 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 PKN1Q16512 942 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 TMTC3Q6ZXV5 915 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 PPFIBP1Q86W92 1011 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 OXER1Q8TDS5 423 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 CCDC47Q96A33 483 aaKnown RBP13.38□□□□□ -0.27
NBR1-202ENST00000542611 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 STX8Q9UNK0 236 aa13.38□□□□□ -0.27
NBR1-202ENST00000542611 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
NBR1-202ENST00000542611 ATP6V1G2O95670 118 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 FAM107AO95990 144 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 PYGLP06737 847 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 BMP6P22004 513 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 ANKRD20A8PQ5CZ79 823 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 C1QTNF12Q5T7M4 302 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
NBR1-202ENST00000542611 SRBD1Q8N5C6 995 aaKnown RBP13.37□□□□□ -0.27
NBR1-202ENST00000542611 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 STAMBPL1Q96FJ0 436 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 CORO1CQ9ULV4 474 aaPredicted RBP13.37□□□□□ -0.27
NBR1-202ENST00000542611 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 A0A1B0GTH6 734 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 BUB1BO60566 1050 aaPredicted RBP13.37□□□□□ -0.27
NBR1-202ENST00000542611 MFAP3LO75121 409 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 NEFHP12036 1026 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 CDK8P49336 464 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 MYO1EQ12965 1108 aa13.37□□□□□ -0.27
NBR1-202ENST00000542611 MTA1Q13330 715 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms