RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 VTI1AQ96AJ9 217 aa19.85■□□□□ 0.77
SFSWAP-205ENST00000537164 PRDM5Q9NQX1 630 aaPredicted RBP19.85■□□□□ 0.77
SFSWAP-205ENST00000537164 FAM217BQ9NTX9 383 aaPredicted RBP19.85■□□□□ 0.77
SFSWAP-205ENST00000537164 PCDH10Q9P2E7 1040 aa19.85■□□□□ 0.77
SFSWAP-205ENST00000537164 DDX41Q9UJV9 622 aaKnown RBP19.85■□□□□ 0.77
SFSWAP-205ENST00000537164 TBX21Q9UL17 535 aa19.85■□□□□ 0.77
SFSWAP-205ENST00000537164 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 KPNA6O60684 536 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 CD4P01730 458 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 CPA1P15085 419 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 RPS6KB1P23443 525 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 ITGB8P26012 769 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 ITGA7Q13683 1181 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 RTN1Q16799 776 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 BRDTQ58F21 947 aaPredicted RBP19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 KCNV1Q6PIU1 500 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 SEPT14Q6ZU15 432 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 TEX2Q8IWB9 1127 aa19.84■□□□□ 0.77
SFSWAP-205ENST00000537164 STAM2O75886 525 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 GH1P01241 217 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 TGFB3P10600 412 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 EVCP57679 992 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 ARHGAP1Q07960 439 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 LY6KQ17RY6 165 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 LRIT3Q3SXY7 679 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 Q6ZUG5 572 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 FCHSD1Q86WN1 690 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 CCDC82Q8N4S0 544 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 IL31RAQ8NI17 732 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 BADQ92934 168 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 TMEM39AQ9NV64 488 aa19.83■□□□□ 0.77
SFSWAP-205ENST00000537164 CDC27P30260 824 aa19.82■□□□□ 0.76
SFSWAP-205ENST00000537164 CCND2P30279 289 aa19.82■□□□□ 0.76
SFSWAP-205ENST00000537164 USP17L6PQ6QN14 398 aa19.82■□□□□ 0.76
SFSWAP-205ENST00000537164 MTG1Q9BT17 334 aaPredicted RBP19.82■□□□□ 0.76
SFSWAP-205ENST00000537164 TM6SF1Q9BZW5 370 aa19.82■□□□□ 0.76
SFSWAP-205ENST00000537164 ZSWIM6Q9HCJ5 1215 aa19.82■□□□□ 0.76
SFSWAP-205ENST00000537164 GOLGA8AA7E2F4 631 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 GOLGA8BA8MQT2 603 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 hCG_1984214I3L0E3 225 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 TLR3O15455 904 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 TIMP1P01033 207 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 MYCLP12524 364 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 RAG1P15918 1043 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 CASTP20810 708 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 MRPS9P82933 396 aaKnown RBP19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 FGD1P98174 961 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 XRRA1Q6P2D8 792 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 ZNF713Q8N859 430 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 BRF1Q92994 677 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 CUL5Q93034 780 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 INPP4AQ96PE3 977 aaPredicted RBP19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 PSTPIP2Q9H939 334 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 MRVI1Q9Y6F6 885 aa19.81■□□□□ 0.76
SFSWAP-205ENST00000537164 CCDC196A0A1B0GTZ2 297 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 hCG_1642624A0A1W2PR95 340 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 MMP3P08254 477 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 PSMC6P62333 389 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 APOBRQ0VD83 1088 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 PCNX4Q63HM2 1172 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 RUFY3Q7L099 469 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 SMARCC2Q8TAQ2 1214 aa19.8■□□□□ 0.76
SFSWAP-205ENST00000537164 MYL3P08590 195 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 HOXD8P13378 290 aaPredicted RBP19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 ICAM3P32942 547 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 ADD1P35611 737 aaKnown RBP19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 LAMC2Q13753 1193 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 MYSM1Q5VVJ2 828 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 WWC2Q6AWC2 1192 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 PPP1R18Q6NYC8 613 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 PPTC7Q8NI37 304 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 AFG1LQ8WV93 481 aa19.79■□□□□ 0.76
SFSWAP-205ENST00000537164 SOX1O00570 391 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 SP2Q02086 613 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 PTPN11Q06124 597 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 GNPTABQ3T906 1256 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 MFSD5Q6N075 450 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 GPR153Q6NV75 609 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 NFRKBQ6P4R8 1299 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 HEATR3Q7Z4Q2 680 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 GPKOWQ92917 476 aaPredicted RBP eCLIP19.78■□□□□ 0.768e-8■■■■■ 30.4
SFSWAP-205ENST00000537164 ALDH8A1Q9H2A2 487 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 BARHL2Q9NY43 387 aa19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 V9GY48 417 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-205ENST00000537164 B4GALT4O60513 344 aa19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 UBA1P22314 1058 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 DGKDQ16760 1214 aa19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 NBPF20Q3BBV1 942 aa19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 CELF3Q5SZQ8 465 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 TYW1BQ6NUM6 668 aa19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 DHX37Q8IY37 1157 aaKnown RBP19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 CYP46A1Q9Y6A2 500 aa19.77■□□□□ 0.76
SFSWAP-205ENST00000537164 SPATA31C2B4DYI2 1134 aa19.76■□□□□ 0.75
SFSWAP-205ENST00000537164 STXBP3O00186 592 aa19.76■□□□□ 0.75
SFSWAP-205ENST00000537164 PPFIA4O75335 1185 aa19.76■□□□□ 0.75
SFSWAP-205ENST00000537164 FPGSQ05932 587 aa19.76■□□□□ 0.75
SFSWAP-205ENST00000537164 TOB2Q14106 344 aaPredicted RBP19.76■□□□□ 0.75
SFSWAP-205ENST00000537164 NTRK3Q16288 839 aa19.76■□□□□ 0.75
SFSWAP-205ENST00000537164 SESTD1Q86VW0 696 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 276.2 ms