RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ESYT2A0FGR8 921 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 DYNC1LI2O43237 492 aaPredicted RBP20.52■□□□□ 0.88
DDX55-204ENST00000536079 EIF3JO75822 258 aaKnown RBP20.52■□□□□ 0.88
DDX55-204ENST00000536079 MRPL12P52815 198 aaKnown RBP20.52■□□□□ 0.88
DDX55-204ENST00000536079 BEX3Q00994 111 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 NPY5RQ15761 445 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 LY6KQ17RY6 165 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 DUSP28Q4G0W2 176 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 JAKMIP3Q5VZ66 844 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 CCSAPQ6IQ19 270 aaPredicted RBP20.52■□□□□ 0.88
DDX55-204ENST00000536079 CPLX2Q6PUV4 134 aaKnown RBP20.52■□□□□ 0.88
DDX55-204ENST00000536079 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
DDX55-204ENST00000536079 B4DLN1 442 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 DNM1LO00429 736 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 CCND2P30279 289 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 GJA9P57773 515 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 SEMA3FQ13275 785 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 TLK2Q86UE8 772 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 MPHOSPH6Q99547 160 aaKnown RBP20.51■□□□□ 0.87
DDX55-204ENST00000536079 BCAS3Q9H6U6 928 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 ORC3Q9UBD5 711 aaPredicted RBP20.51■□□□□ 0.87
DDX55-204ENST00000536079 KCNJ14Q9UNX9 436 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 STK36Q9NRP7 1315 aa20.51■□□□□ 0.87
DDX55-204ENST00000536079 CDKL5O76039 1030 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 TXNP10599 105 aaKnown RBP20.5■□□□□ 0.87
DDX55-204ENST00000536079 NKX3-2P78367 333 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 SP2Q02086 613 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 ARRDC4Q8NCT1 418 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 SCFD2Q8WU76 684 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 FERMT2Q96AC1 680 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 ANO3Q9BYT9 981 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 C11orf49Q9H6J7 331 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 SH3GLB2Q9NR46 395 aa20.5■□□□□ 0.87
DDX55-204ENST00000536079 EDIL3O43854 480 aa20.49■□□□□ 0.87
DDX55-204ENST00000536079 SORBS3O60504 671 aa20.49■□□□□ 0.87
DDX55-204ENST00000536079 C6orf222P0C671 652 aaPredicted RBP20.49■□□□□ 0.87
DDX55-204ENST00000536079 MLLT1Q03111 559 aaPredicted RBP20.49■□□□□ 0.87
DDX55-204ENST00000536079 KCNA10Q16322 511 aa20.49■□□□□ 0.87
DDX55-204ENST00000536079 PCNX4Q63HM2 1172 aa20.49■□□□□ 0.87
DDX55-204ENST00000536079 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
DDX55-204ENST00000536079 ZSCAN31Q96LW9 406 aaPredicted RBP20.49■□□□□ 0.87
DDX55-204ENST00000536079 SENP6Q9GZR1 1112 aaPredicted RBP20.49■□□□□ 0.87
DDX55-204ENST00000536079 C6orf50Q9HD87 102 aa20.49■□□□□ 0.87
DDX55-204ENST00000536079 DDX41Q9UJV9 622 aaKnown RBP20.49■□□□□ 0.87
DDX55-204ENST00000536079 DNAH12Q6ZR08 3092 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 CAPN2P17655 700 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 ITGB5P18084 799 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 FOSBP53539 338 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 NLRP5P59047 1200 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 CCDC12Q8WUD4 166 aaPredicted RBP20.48■□□□□ 0.87
DDX55-204ENST00000536079 INPP4AQ96PE3 977 aaPredicted RBP20.48■□□□□ 0.87
DDX55-204ENST00000536079 PCDH10Q9P2E7 1040 aa20.48■□□□□ 0.87
DDX55-204ENST00000536079 M0R2N6 131 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 ST18O60284 1047 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 CST5P28325 142 aaPredicted RBP20.47■□□□□ 0.87
DDX55-204ENST00000536079 ARHGAP1Q07960 439 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 TTLL4Q14679 1199 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 GNASQ5JWF2 1037 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 RNF180Q86T96 592 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 CCDC148Q8NFR7 591 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 CRYGNQ8WXF5 182 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 TMX3Q96JJ7 454 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 ALG1Q9BT22 464 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 PHF20Q9BVI0 1012 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
DDX55-204ENST00000536079 PCDHA4Q9UN74 947 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 PHF24Q9UPV7 400 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 Q9Y3F1 56 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 TELO2Q9Y4R8 837 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 UBIAD1Q9Y5Z9 338 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 MRVI1Q9Y6F6 885 aa20.47■□□□□ 0.87
DDX55-204ENST00000536079 SPATA31C2B4DYI2 1134 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 KBTBD13C9JR72 458 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 GNA11P29992 359 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 ATN1P54259 1190 aaPredicted RBP20.46■□□□□ 0.87
DDX55-204ENST00000536079 AP3B2Q13367 1082 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 FSCN1Q16658 493 aaKnown RBP20.46■□□□□ 0.87
DDX55-204ENST00000536079 LRRC26Q2I0M4 334 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 REXO1Q8N1G1 1221 aaKnown RBP20.46■□□□□ 0.87
DDX55-204ENST00000536079 OXER1Q8TDS5 423 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 AP5M1Q9H0R1 490 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
DDX55-204ENST00000536079 A0A1W2PQ45 241 aaPredicted RBP20.45■□□□□ 0.86
DDX55-204ENST00000536079 A0A1W2PQY0 241 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 FOSP01100 380 aaPredicted RBP20.45■□□□□ 0.86
DDX55-204ENST00000536079 ASGR1P07306 291 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 UBA1P22314 1058 aaKnown RBP20.45■□□□□ 0.86
DDX55-204ENST00000536079 ICAM3P32942 547 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 SREBF1P36956 1147 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 ACLYP53396 1101 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 BLIDQ8IZY5 108 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 TSEN34Q9BSV6 310 aaKnown RBP20.45■□□□□ 0.86
DDX55-204ENST00000536079 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
DDX55-204ENST00000536079 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.86
DDX55-204ENST00000536079 ATP9AO75110 1047 aa20.44■□□□□ 0.86
DDX55-204ENST00000536079 ARHGAP4P98171 946 aa20.44■□□□□ 0.86
DDX55-204ENST00000536079 XRRA1Q6P2D8 792 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms