RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF623O75123 536 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 NTRK1P04629 796 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 C8BP07358 591 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 CD3EP07766 207 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 ACRP10323 421 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 IFNGR1P15260 489 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 IL13P35225 146 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 TCEAL1Q15170 157 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 SEZ6Q53EL9 994 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 PRR31Q5SQ13 230 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 PRAMEF18Q5VWM3 479 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 C9orf131Q5VYM1 1079 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 EEF1DP3Q658K8 133 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 DCAF15Q66K64 600 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 ARHGEF18Q6ZSZ5 1173 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 STK32CQ86UX6 486 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 ZC3H18Q86VM9 953 aaKnown RBP1.72□□□□□ -2.13
COPB1-212ENST00000534771 LDLRAD3Q86YD5 345 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 CPNE8Q86YQ8 564 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 FIBCD1Q8N539 461 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 DNERQ8NFT8 737 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 IGDCC4Q8TDY8 1250 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 FAM161BQ96MY7 647 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 SYT3Q9BQG1 590 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 MTA3Q9BTC8 594 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 NOL6Q9H6R4 1146 aaKnown RBP1.72□□□□□ -2.13
COPB1-212ENST00000534771 MRS2Q9HD23 443 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 KBTBD4Q9NVX7 518 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.72□□□□□ -2.13
COPB1-212ENST00000534771 PTGFRNQ9P2B2 879 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 GULP1Q9UBP9 304 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 ZDHHC9Q9Y397 364 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 FHOD1Q9Y613 1164 aa1.72□□□□□ -2.13
COPB1-212ENST00000534771 FAM86C2PA6NEL3 165 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 MEIS3P2A8K0S8 358 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 PATE3B3GLJ2 98 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 AURKAO14965 403 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 NPHS1O60500 1241 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 VAMP4O75379 141 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 FUCA1P04066 466 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 TP53P04637 393 aaPredicted RBP1.71□□□□□ -2.14
COPB1-212ENST00000534771 ITGA4P13612 1032 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 ITGAEP38570 1179 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 CRKP46108 304 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 SEPHS1P49903 392 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 SELENOPP49908 381 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 PMS1P54277 932 aaKnown RBP1.71□□□□□ -2.14
COPB1-212ENST00000534771 EPHB4P54760 987 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 ITGA1P56199 1179 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 C21orf58P58505 322 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 RBM10P98175 930 aaKnown RBP1.71□□□□□ -2.14
COPB1-212ENST00000534771 APOBRQ0VD83 1088 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 MAPK7Q13164 816 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 R3HDM1Q15032 1099 aaKnown RBP1.71□□□□□ -2.14
COPB1-212ENST00000534771 HS1BP3Q53T59 392 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 AXDND1Q5T1B0 1012 aaPredicted RBP1.71□□□□□ -2.14
COPB1-212ENST00000534771 SLFN13Q68D06 897 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 WWC2Q6AWC2 1192 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 RCSD1Q6JBY9 416 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 KBTBD2Q8IY47 623 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 FAM26EQ8N5C1 309 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 NKD1Q969G9 470 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 WWC2-AS2Q96NR7 200 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 AP5M1Q9H0R1 490 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 TMEM168Q9H0V1 697 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 L2HGDHQ9H9P8 463 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 NGRNQ9NPE2 291 aaKnown RBP1.71□□□□□ -2.14
COPB1-212ENST00000534771 COPRSQ9NQ92 184 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 FBLN5Q9UBX5 448 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 SIT1Q9Y3P8 196 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 ZNF451Q9Y4E5 1061 aa1.71□□□□□ -2.14
COPB1-212ENST00000534771 TRBV23OR9-2A0A075B6M9 112 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 C7orf72A4D263 438 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 C2orf71A6NGG8 1288 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 SGSM2O43147 1006 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 CYP7B1O75881 506 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 ZNF37AP17032 561 aaPredicted RBP1.7□□□□□ -2.14
COPB1-212ENST00000534771 ZNF28P17035 718 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 PAMP19021 973 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 NKX3-2P78367 333 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 KCNA1Q09470 495 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 PPP2R5DQ14738 602 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 PRKD1Q15139 912 aaPredicted RBP1.7□□□□□ -2.14
COPB1-212ENST00000534771 MIIPQ5JXC2 388 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 TDRD10Q5VZ19 366 aaKnown RBP1.7□□□□□ -2.14
COPB1-212ENST00000534771 ERMP1Q7Z2K6 904 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 MILR1Q7Z6M3 343 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 MIB1Q86YT6 1006 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 DCP2Q8IU60 420 aaKnown RBP1.7□□□□□ -2.14
COPB1-212ENST00000534771 SLITRK4Q8IW52 837 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 C9orf106Q8NAJ2 232 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 Q8TCH9 128 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 SEC14L1Q92503 715 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 RNF34Q969K3 372 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 ZNF503Q96F45 646 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 ZDHHC15Q96MV8 337 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 PTPN18Q99952 460 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 MCMBPQ9BTE3 642 aa1.7□□□□□ -2.14
COPB1-212ENST00000534771 BARX1Q9HBU1 254 aaPredicted RBP1.7□□□□□ -2.14
COPB1-212ENST00000534771 UBP1Q9NZI7 540 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms