RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 ZNF286BP0CG31 522 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 RABGGTBP53611 331 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 ARHGAP1Q07960 439 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 PWP2Q15269 919 aaKnown RBP13.25□□□□□ -0.29
CPNE7-206ENST00000532500 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 PPM1EQ8WY54 764 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 NKX2-4Q9H2Z4 354 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 NOD1Q9Y239 953 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 MRVI1Q9Y6F6 885 aa13.25□□□□□ -0.29
CPNE7-206ENST00000532500 VCANP13611 3396 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 TCF20Q9UGU0 1960 aaKnown RBP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 A6NJR5 290 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 CYTH3O43739 400 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 NR3C2P08235 984 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 RXRAP19793 462 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 NT5C2P49902 561 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 CCDC62Q6P9F0 684 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 CATIPQ7Z7H3 387 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 MB21D2Q8IYB1 491 aaPredicted RBP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 LRRC2Q9BYS8 371 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 ZNF576Q9H609 170 aa13.24□□□□□ -0.29
CPNE7-206ENST00000532500 COL4A4P53420 1690 aaPredicted RBP13.24□□□□□ -0.29
CPNE7-206ENST00000532500 MICAL3Q7RTP6 2002 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 PRC1O43663 620 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 MYOGP15173 224 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 HSD17B4P51659 736 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 NFXL1Q6ZNB6 911 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 ZNF654Q8IZM8 581 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 HERVK_113Q902F9 699 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 MAP4K1Q92918 833 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 MTMR8Q96EF0 704 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 IWS1Q96ST2 819 aa13.23□□□□□ -0.29
CPNE7-206ENST00000532500 YBX2Q9Y2T7 364 aaKnown RBP13.23□□□□□ -0.29
CPNE7-206ENST00000532500 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 SUPT20HL2P0C7V6 817 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 TROAPQ12815 778 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 PGM5Q15124 567 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 PTGISQ16647 500 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 RASIP1Q5U651 963 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
CPNE7-206ENST00000532500 CASC1Q6TDU7 716 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
CPNE7-206ENST00000532500 IGDCC4Q8TDY8 1250 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 VWCEQ96DN2 955 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 PDCD2LQ9BRP1 358 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 ESYT1Q9BSJ8 1104 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 FTOQ9C0B1 505 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPNE7-206ENST00000532500 LSG1Q9H089 658 aaKnown RBP13.22□□□□□ -0.29
CPNE7-206ENST00000532500 BCAS3Q9H6U6 928 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 RIOX1Q9H6W3 641 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 LY9Q9HBG7 655 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 MSRAQ9UJ68 235 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 DDX41Q9UJV9 622 aaKnown RBP13.22□□□□□ -0.29
CPNE7-206ENST00000532500 SLC4A7Q9Y6M7 1214 aa13.22□□□□□ -0.29
CPNE7-206ENST00000532500 SIP14410 1827 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
CPNE7-206ENST00000532500 SLC27A2O14975 620 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 KPNA6O60684 536 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 EIF3JO75822 258 aaKnown RBP13.21□□□□□ -0.29
CPNE7-206ENST00000532500 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 GGPS1O95749 300 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 PSEN2P49810 448 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 CCDC85BQ15834 202 aaPredicted RBP13.21□□□□□ -0.29
CPNE7-206ENST00000532500 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 RPUSD2Q8IZ73 545 aaKnown RBP13.21□□□□□ -0.29
CPNE7-206ENST00000532500 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 USP38Q8NB14 1042 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 RETREG2Q8NC44 543 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 KAT2BQ92831 832 aa13.21□□□□□ -0.29
CPNE7-206ENST00000532500 MTIF3Q9H2K0 278 aaKnown RBP13.21□□□□□ -0.29
CPNE7-206ENST00000532500 NLRC5Q86WI3 1866 aa13.21□□□□□ -0.3
CPNE7-206ENST00000532500 WDR81Q562E7 1941 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 RGS20O76081 388 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
CPNE7-206ENST00000532500 IGFBP4P22692 258 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 CCND2P30279 289 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
CPNE7-206ENST00000532500 SP2Q02086 613 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 SP4Q02446 784 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 DGKDQ16760 1214 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 MICALL1Q8N3F8 863 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
CPNE7-206ENST00000532500 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 SEZ6LQ9BYH1 1024 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 CERS4Q9HA82 394 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
CPNE7-206ENST00000532500 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms