RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 HDAC6Q9UBN7 1215 aa24.69■■□□□ 1.54
CHKA-206ENST00000531341 CXCL10P02778 98 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 PDE1AP54750 535 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 CNKSR3Q6P9H4 555 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 TRAF7Q6Q0C0 670 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 MFSD6Q6ZSS7 791 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 CCDC155Q8N6L0 562 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 ZBED2Q9BTP6 218 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 GTF2IRD1Q9UHL9 959 aa24.68■■□□□ 1.54
CHKA-206ENST00000531341 NEDD4P46934 1319 aa24.67■■□□□ 1.54
CHKA-206ENST00000531341 FAM86C2PA6NEL3 165 aa24.67■■□□□ 1.54
CHKA-206ENST00000531341 B4DLN1 442 aa24.67■■□□□ 1.54
CHKA-206ENST00000531341 HOXD11P31277 338 aaPredicted RBP24.67■■□□□ 1.54
CHKA-206ENST00000531341 MRPL12P52815 198 aaKnown RBP24.67■■□□□ 1.54
CHKA-206ENST00000531341 RBL2Q08999 1139 aa24.67■■□□□ 1.54
CHKA-206ENST00000531341 CDC37Q16543 378 aaPredicted RBP24.67■■□□□ 1.54
CHKA-206ENST00000531341 ZMYM6O95789 1325 aa24.66■■□□□ 1.54
CHKA-206ENST00000531341 GJB5O95377 273 aa24.66■■□□□ 1.54
CHKA-206ENST00000531341 CASTP20810 708 aaKnown RBP24.66■■□□□ 1.54
CHKA-206ENST00000531341 ZNF200P98182 395 aaPredicted RBP24.66■■□□□ 1.54
CHKA-206ENST00000531341 HIC1Q14526 733 aa24.66■■□□□ 1.54
CHKA-206ENST00000531341 TRIM71Q2Q1W2 868 aaKnown RBP24.66■■□□□ 1.54
CHKA-206ENST00000531341 GPATCH4Q5T3I0 446 aaKnown RBP24.66■■□□□ 1.54
CHKA-206ENST00000531341 ADGRF4Q8IZF3 695 aa24.66■■□□□ 1.54
CHKA-206ENST00000531341 ALG1Q9BT22 464 aa24.66■■□□□ 1.54
CHKA-206ENST00000531341 DDX41Q9UJV9 622 aaKnown RBP24.66■■□□□ 1.54
CHKA-206ENST00000531341 PSEN2P49810 448 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 MBTPS1Q14703 1052 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 STXBP2Q15833 593 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 TMEM31Q5JXX7 168 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 FAM117BQ6P1L5 589 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 NSUN6Q8TEA1 469 aaKnown RBP24.65■■□□□ 1.54
CHKA-206ENST00000531341 RMDN3Q96TC7 470 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 RAD9AQ99638 391 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 LMCD1Q9NZU5 365 aa24.65■■□□□ 1.54
CHKA-206ENST00000531341 ABCB11O95342 1321 aa24.64■■□□□ 1.54
CHKA-206ENST00000531341 LINC01553A4QN01 128 aa24.64■■□□□ 1.54
CHKA-206ENST00000531341 EIF2AK2P19525 551 aaKnown RBP24.64■■□□□ 1.54
CHKA-206ENST00000531341 ERVK-21P61565 698 aa24.64■■□□□ 1.54
CHKA-206ENST00000531341 DGKDQ16760 1214 aa24.64■■□□□ 1.54
CHKA-206ENST00000531341 C7orf31Q8N865 590 aa24.64■■□□□ 1.54
CHKA-206ENST00000531341 CCDC171Q6TFL3 1326 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.63■■□□□ 1.53
CHKA-206ENST00000531341 HAS3O00219 553 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 ZNF286BP0CG31 522 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 QRICH1Q2TAL8 776 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 ZNF618Q5T7W0 954 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.63■■□□□ 1.53
CHKA-206ENST00000531341 DGKHQ86XP1 1220 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 PNMA1Q8ND90 353 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 IWS1Q96ST2 819 aa24.63■■□□□ 1.53
CHKA-206ENST00000531341 ABHD14A-ACY1A0A1B0GW23 586 aa24.62■■□□□ 1.53
CHKA-206ENST00000531341 SORBS3O60504 671 aa24.62■■□□□ 1.53
CHKA-206ENST00000531341 MFSD10Q14728 455 aa24.62■■□□□ 1.53
CHKA-206ENST00000531341 KIAA0753Q2KHM9 967 aa24.62■■□□□ 1.53
CHKA-206ENST00000531341 ESR2Q92731 530 aa24.62■■□□□ 1.53
CHKA-206ENST00000531341 TGS1Q96RS0 853 aaKnown RBP24.62■■□□□ 1.53
CHKA-206ENST00000531341 VAT1LQ9HCJ6 419 aa24.62■■□□□ 1.53
CHKA-206ENST00000531341 GPR37L1O60883 481 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 F2P00734 622 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 PCP11498 1178 aaKnown RBP24.61■■□□□ 1.53
CHKA-206ENST00000531341 PTK7Q13308 1070 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 ARHGEF16Q5VV41 709 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 EMID1Q96A84 441 aaPredicted RBP24.61■■□□□ 1.53
CHKA-206ENST00000531341 C17orf80Q9BSJ5 609 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 UBE2ZQ9H832 354 aaPredicted RBP24.61■■□□□ 1.53
CHKA-206ENST00000531341 JMJD4Q9H9V9 463 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 PXMP2Q9NR77 195 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 HCN4Q9Y3Q4 1203 aa24.61■■□□□ 1.53
CHKA-206ENST00000531341 PI4K2BG5E9Z4 385 aa24.6■■□□□ 1.53
CHKA-206ENST00000531341 OPLAHO14841 1288 aa24.6■■□□□ 1.53
CHKA-206ENST00000531341 EIF3JO75822 258 aaKnown RBP24.6■■□□□ 1.53
CHKA-206ENST00000531341 RGS20O76081 388 aa24.6■■□□□ 1.53
CHKA-206ENST00000531341 PARNO95453 639 aaKnown RBP24.6■■□□□ 1.53
CHKA-206ENST00000531341 IKBKEQ14164 716 aa24.6■■□□□ 1.53
CHKA-206ENST00000531341 MCF2L2Q86YR7 1114 aa24.6■■□□□ 1.53
CHKA-206ENST00000531341 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.6■■□□□ 1.53
CHKA-206ENST00000531341 ZBTB47Q9UFB7 747 aaPredicted RBP24.6■■□□□ 1.53
CHKA-206ENST00000531341 MRVI1Q9Y6F6 885 aa24.6■■□□□ 1.53
CHKA-206ENST00000531341 KDM4AO75164 1064 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 NR3C2P08235 984 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 LAMC2Q13753 1193 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 FBXO11Q86XK2 927 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 DHX37Q8IY37 1157 aaKnown RBP24.59■■□□□ 1.53
CHKA-206ENST00000531341 PPTC7Q8NI37 304 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 RILPL2Q969X0 211 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 MAF1Q9H063 256 aa24.59■■□□□ 1.53
CHKA-206ENST00000531341 RNF41Q9H4P4 317 aaPredicted RBP24.59■■□□□ 1.53
CHKA-206ENST00000531341 ARIH1Q9Y4X5 557 aaPredicted RBP24.59■■□□□ 1.53
CHKA-206ENST00000531341 WDFY4Q6ZS81 3184 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 TRIM6-TRIM34B2RNG4 842 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 ZNF213O14771 459 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 CFBP00751 764 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 MKRN4PQ13434 485 aaPredicted RBP24.58■■□□□ 1.53
CHKA-206ENST00000531341 ANKS1AQ92625 1134 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 OSBPL7Q9BZF2 842 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 KAT14Q9H8E8 782 aa24.58■■□□□ 1.53
CHKA-206ENST00000531341 MRPL11Q9Y3B7 192 aaKnown RBP24.58■■□□□ 1.53
CHKA-206ENST00000531341 KIAA1217Q5T5P2 1943 aa24.57■■□□□ 1.52
CHKA-206ENST00000531341 B4E1Z4 1266 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms