RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
CSTF3-206ENST00000524827 CDC37Q16543 378 aaPredicted RBP16.21■□□□□ 0.19
CSTF3-206ENST00000524827 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 SYTL5Q8TDW5 730 aaPredicted RBP16.21■□□□□ 0.19
CSTF3-206ENST00000524827 TAAR1Q96RJ0 339 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 LMCD1Q9NZU5 365 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 COL20A1Q9P218 1284 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 HDAC6Q9UBN7 1215 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 MTUS1Q9ULD2 1270 aa16.21■□□□□ 0.19
CSTF3-206ENST00000524827 ABCB11O95342 1321 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 GJB5O95377 273 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 PARNO95453 639 aaKnown RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 PCP11498 1178 aaKnown RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 CKBP12277 381 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 PDE1AP54750 535 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 NMIQ13287 307 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 DGKDQ16760 1214 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 NSUN6Q8TEA1 469 aaKnown RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 RAD9AQ99638 391 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 MAF1Q9H063 256 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 C11orf16Q9NQ32 467 aa16.2■□□□□ 0.18
CSTF3-206ENST00000524827 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 ARIH1Q9Y4X5 557 aaPredicted RBP16.2■□□□□ 0.18
CSTF3-206ENST00000524827 NEDD4P46934 1319 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 SIP14410 1827 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 ABHD14A-ACY1A0A1B0GW23 586 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 PSEN2P49810 448 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 ERVK-21P61565 698 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 STXBP2Q15833 593 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 ANKRD45Q5TZF3 282 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 TGS1Q96RS0 853 aaKnown RBP16.19■□□□□ 0.18
CSTF3-206ENST00000524827 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 RMDN3Q96TC7 470 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 ZKSCAN3Q9BRR0 538 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 SUGCTQ9HAC7 445 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 CD320Q9NPF0 282 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 PIEZO1Q92508 2521 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 MUC6Q6W4X9 2439 aa16.19■□□□□ 0.18
CSTF3-206ENST00000524827 LINC01553A4QN01 128 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 FAM86C2PA6NEL3 165 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 F2P00734 622 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 EIF2AK2P19525 551 aaKnown RBP16.18■□□□□ 0.18
CSTF3-206ENST00000524827 MFSD10Q14728 455 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 TRIM71Q2Q1W2 868 aaKnown RBP16.18■□□□□ 0.18
CSTF3-206ENST00000524827 FAM117BQ6P1L5 589 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 TRAF7Q6Q0C0 670 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 DGKHQ86XP1 1220 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 ADGRF4Q8IZF3 695 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 PNMA1Q8ND90 353 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 ESR2Q92731 530 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 WNT8BQ93098 351 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 EMID1Q96A84 441 aaPredicted RBP16.18■□□□□ 0.18
CSTF3-206ENST00000524827 KATNAL1Q9BW62 490 aa16.18■□□□□ 0.18
CSTF3-206ENST00000524827 RNF41Q9H4P4 317 aaPredicted RBP16.18■□□□□ 0.18
CSTF3-206ENST00000524827 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
CSTF3-206ENST00000524827 DDX41Q9UJV9 622 aaKnown RBP16.18■□□□□ 0.18
CSTF3-206ENST00000524827 HAS3O00219 553 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 GPR37L1O60883 481 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 EFCAB14O75071 495 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 PTK7Q13308 1070 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 IKBKEQ14164 716 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 MBTPS1Q14703 1052 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 KIAA0753Q2KHM9 967 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 QRICH1Q2TAL8 776 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 TICAM2Q86XR7 235 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 MCF2L2Q86YR7 1114 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 MYH6P13533 1939 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
CSTF3-206ENST00000524827 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
CSTF3-206ENST00000524827 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
CSTF3-206ENST00000524827 ZNF618Q5T7W0 954 aa16.16■□□□□ 0.18
CSTF3-206ENST00000524827 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
CSTF3-206ENST00000524827 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
CSTF3-206ENST00000524827 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
CSTF3-206ENST00000524827 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
CSTF3-206ENST00000524827 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
CSTF3-206ENST00000524827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.15■□□□□ 0.18
CSTF3-206ENST00000524827 PI4K2BG5E9Z4 385 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 LGR5O75473 907 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 NR3C2P08235 984 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 ZNF200P98182 395 aaPredicted RBP16.15■□□□□ 0.18
CSTF3-206ENST00000524827 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 IQCA1Q86XH1 822 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 FBXO11Q86XK2 927 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
CSTF3-206ENST00000524827 KAT14Q9H8E8 782 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 PXMP2Q9NR77 195 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 MYH7BA7E2Y1 1941 aa16.15■□□□□ 0.18
CSTF3-206ENST00000524827 MICAL3Q7RTP6 2002 aa16.14■□□□□ 0.17
CSTF3-206ENST00000524827 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
CSTF3-206ENST00000524827 KDM4AO75164 1064 aa16.14■□□□□ 0.17
CSTF3-206ENST00000524827 CFBP00751 764 aa16.14■□□□□ 0.17
CSTF3-206ENST00000524827 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms