RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 CDC45O75419 566 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
PVT1-216ENST00000523068 CSF2RAP15509 400 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
PVT1-216ENST00000523068 CYP2C18P33260 490 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 PGM5Q15124 567 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 LY6KQ17RY6 165 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
PVT1-216ENST00000523068 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.6□□□□□ -0.391e-10■□□□□ 10.1
PVT1-216ENST00000523068 PDCD2LQ9BRP1 358 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
PVT1-216ENST00000523068 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 DDX41Q9UJV9 622 aaKnown RBP12.6□□□□□ -0.39
PVT1-216ENST00000523068 STXBP5LQ9Y2K9 1186 aa12.6□□□□□ -0.39
PVT1-216ENST00000523068 TANC1Q9C0D5 1861 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 TMEM265A0A087WTH1 108 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.59□□□□□ -0.39
PVT1-216ENST00000523068 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.59□□□□□ -0.39
PVT1-216ENST00000523068 MMP3P08254 477 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 TGFB3P10600 412 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
PVT1-216ENST00000523068 CCND2P30279 289 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 DGKDQ16760 1214 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 VSIG10LQ86VR7 867 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 RPUSD2Q8IZ73 545 aaKnown RBP12.59□□□□□ -0.39
PVT1-216ENST00000523068 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 CUL5Q93034 780 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
PVT1-216ENST00000523068 SLC12A7Q9Y666 1083 aa12.59□□□□□ -0.39
PVT1-216ENST00000523068 STAM2O75886 525 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 KRT32Q14532 448 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 FCHSD1Q86WN1 690 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 DHX37Q8IY37 1157 aaKnown RBP12.58□□□□□ -0.4
PVT1-216ENST00000523068 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 GBF1Q92538 1859 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 KATNAL1Q9BW62 490 aa12.58□□□□□ -0.4
PVT1-216ENST00000523068 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
PVT1-216ENST00000523068 TRIP12Q14669 1992 aaPredicted RBP12.58□□□□□ -0.4
PVT1-216ENST00000523068 SCN5AQ14524 2016 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 FGBP02675 491 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 ACRP10323 421 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 CCL23P55773 120 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 TSGA10IPQ3SY00 556 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 ZNF365Q70YC5 407 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 C16orf59Q7L2K0 433 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 SKAP1Q86WV1 359 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
PVT1-216ENST00000523068 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 PPTC7Q8NI37 304 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 FAM161BQ96MY7 647 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 SEMA6BQ9H3T3 888 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 COL6A3P12111 3177 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 DOCK5Q9H7D0 1870 aa12.57□□□□□ -0.4
PVT1-216ENST00000523068 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 PFKMP08237 780 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
PVT1-216ENST00000523068 RFC2P35250 354 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 CHMP4BP1P59074 171 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 BFSP2Q13515 415 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
PVT1-216ENST00000523068 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 SESTD1Q86VW0 696 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 CCDC155Q8N6L0 562 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 LRRC2Q9BYS8 371 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 WNT8AQ9H1J5 351 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
PVT1-216ENST00000523068 FRMPD4Q14CM0 1322 aa12.56□□□□□ -0.4
PVT1-216ENST00000523068 PPFIA4O75335 1185 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 RGS20O76081 388 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 GGPS1O95749 300 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 CYP2C9P11712 490 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 RXRAP19793 462 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 DNAJB2P25686 324 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 PTGISQ16647 500 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 TMTC3Q6ZXV5 915 aa12.55□□□□□ -0.4
PVT1-216ENST00000523068 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms