RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SCYL3Q8IZE3 742 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 PRPF38AQ8NAV1 312 aaKnown RBP18.9■□□□□ 0.62
SREK1-212ENST00000522912 GIMAP8Q8ND71 665 aaPredicted RBP18.9■□□□□ 0.62
SREK1-212ENST00000522912 ZKSCAN4Q969J2 545 aaPredicted RBP18.9■□□□□ 0.62
SREK1-212ENST00000522912 SPTLC3Q9NUV7 552 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 PHIPQ8WWQ0 1821 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 TBX3O15119 743 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 ICAM1P05362 532 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 STAT3P40763 770 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 SPIRE1Q08AE8 756 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 ARMCX5Q6P1M9 558 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 WRNIP1Q96S55 665 aa18.9■□□□□ 0.62
SREK1-212ENST00000522912 PARP14Q460N5 1801 aa18.89■□□□□ 0.61
SREK1-212ENST00000522912 CCT6AP40227 531 aaKnown RBP18.89■□□□□ 0.61
SREK1-212ENST00000522912 CCZ1BP86790 482 aa18.89■□□□□ 0.61
SREK1-212ENST00000522912 CCZ1P86791 482 aaPredicted RBP18.89■□□□□ 0.61
SREK1-212ENST00000522912 SPP2Q13103 211 aa18.89■□□□□ 0.61
SREK1-212ENST00000522912 CCPG1Q9ULG6 757 aa18.89■□□□□ 0.61
SREK1-212ENST00000522912 MSH4O15457 936 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 VCAM1P19320 739 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 PDE4DQ08499 809 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 HOOK2Q96ED9 719 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 WDR18Q9BV38 432 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 EXOC1Q9NV70 894 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 SSC5DA1L4H1 1573 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 IGLV3-22A0A075B6J6 115 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 DDNO94850 711 aaPredicted RBP18.88■□□□□ 0.61
SREK1-212ENST00000522912 PTPRAP18433 802 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 ZNF76P36508 570 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 NR1I3Q14994 352 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 FAM20AQ96MK3 541 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 TANGO6Q9C0B7 1094 aa18.88■□□□□ 0.61
SREK1-212ENST00000522912 A0A1B0GTH6 734 aa18.87■□□□□ 0.61
SREK1-212ENST00000522912 TRIM49BA6NDI0 452 aa18.87■□□□□ 0.61
SREK1-212ENST00000522912 FCER1AP12319 257 aa18.87■□□□□ 0.61
SREK1-212ENST00000522912 PMS1P54277 932 aaKnown RBP18.87■□□□□ 0.61
SREK1-212ENST00000522912 STK4Q13043 487 aa18.87■□□□□ 0.61
SREK1-212ENST00000522912 TPD52L1Q16890 204 aaPredicted RBP18.87■□□□□ 0.61
SREK1-212ENST00000522912 CCDC47Q96A33 483 aaKnown RBP18.87■□□□□ 0.61
SREK1-212ENST00000522912 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
SREK1-212ENST00000522912 POTEB3A0JP26 581 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 POTECB2RU33 542 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 MED24O75448 989 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 FLOT1O75955 427 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 USP14P54578 494 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 BACE1P56817 501 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 UBXN2AP68543 259 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 POTEBQ6S5H4 581 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 DYMQ7RTS9 669 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 CLEC4DQ8WXI8 215 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 NT5C3AQ9H0P0 336 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 RPAP3Q9H6T3 665 aaPredicted RBP18.86■□□□□ 0.61
SREK1-212ENST00000522912 SLC38A10Q9HBR0 1119 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 KIAA1024Q9UPX6 916 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 RLFQ13129 1914 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 SLC26A4O43511 780 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 SKILP12757 684 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 HSD17B4P51659 736 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 CNNM4Q6P4Q7 775 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 UNC13DQ70J99 1090 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 CCDC150Q8NCX0 1101 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 ZNF280CQ8ND82 737 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 HPS3Q969F9 1004 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 KLRG1Q96E93 195 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 RAVER2Q9HCJ3 691 aaKnown RBP18.86■□□□□ 0.61
SREK1-212ENST00000522912 PICK1Q9NRD5 415 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 ADD3Q9UEY8 706 aaKnown RBP18.86■□□□□ 0.61
SREK1-212ENST00000522912 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 PPP1R9AQ9ULJ8 1098 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 PPP2R3BQ9Y5P8 575 aa18.86■□□□□ 0.61
SREK1-212ENST00000522912 PVALEFA0A1B0GWK0 134 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 E9PMD0 336 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 NFIBO00712 420 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 TEX33O43247 280 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 STIM1Q13586 685 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.85■□□□□ 0.61
SREK1-212ENST00000522912 CPXCR1Q8N123 301 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 DDX12PQ92771 950 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 SYT17Q9BSW7 474 aa18.85■□□□□ 0.61
SREK1-212ENST00000522912 TBX2Q13207 712 aaPredicted RBP18.84■□□□□ 0.61
SREK1-212ENST00000522912 NCAPH2Q6IBW4 605 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 KIAA0895Q8NCT3 520 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 DHTKD1Q96HY7 919 aaPredicted RBP18.84■□□□□ 0.61
SREK1-212ENST00000522912 AS3MTQ9HBK9 375 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 LIMA1Q9UHB6 759 aaKnown RBP18.84■□□□□ 0.61
SREK1-212ENST00000522912 ZHX2Q9Y6X8 837 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 PSMA7O14818 248 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 YBX3P16989 372 aaKnown RBP eCLIP18.84■□□□□ 0.61
SREK1-212ENST00000522912 SFPQP23246 707 aaKnown RBP eCLIP18.84■□□□□ 0.61
SREK1-212ENST00000522912 KRT31Q15323 416 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 TTI2Q6NXR4 508 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 CATSPER3Q86XQ3 398 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 IRF2BP1Q8IU81 584 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 DNAJC19Q96DA6 116 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 LRRC27Q9C0I9 530 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
SREK1-212ENST00000522912 COL11A1P12107 1806 aaPredicted RBP18.84■□□□□ 0.61
SREK1-212ENST00000522912 RBBP6Q7Z6E9 1792 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms