RNA–Protein interactions for RNA: ENST00000521710.1

NPM1-209, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-209ENST00000521710 LSAMPQ13449 338 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 FAM50AQ14320 339 aaKnown RBP3.85□□□□□ -1.79
NPM1-209ENST00000521710 KIZQ2M2Z5 673 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 TMEM177Q53S58 311 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 INTS5Q6P9B9 1019 aaKnown RBP3.85□□□□□ -1.79
NPM1-209ENST00000521710 CEP68Q76N32 757 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 OVCH1Q7RTY7 1134 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 VSIG10LQ86VR7 867 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 STK11IPQ8N1F8 1099 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 Q8N1Y9 231 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 CHAMP1Q96JM3 812 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 ALG1Q9BT22 464 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 MBNL3Q9NUK0 354 aaKnown RBP3.85□□□□□ -1.79
NPM1-209ENST00000521710 CLDND1Q9NY35 253 aa3.85□□□□□ -1.79
NPM1-209ENST00000521710 DDX56Q9NY93 547 aaKnown RBP3.85□□□□□ -1.79
NPM1-209ENST00000521710 A0A1W2PQ45 241 aaPredicted RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 A0A1W2PQY0 241 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 C22orf46C9J442 243 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 NKRFO15226 690 aaKnown RBP eCLIP3.84□□□□□ -1.79
NPM1-209ENST00000521710 NPHS1O60500 1241 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 AMY2AP04746 511 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 RNASE1P07998 156 aaKnown RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 COL6A2P12110 1019 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 AMY2BP19961 511 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 ENDOUP21128 410 aaKnown RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 KIR2DL1P43626 348 aaPredicted RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 KIR2DL2P43627 348 aaPredicted RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 DSG1Q02413 1049 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 CT47A1Q5JQC4 288 aaPredicted RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 HLA-DQA1Q5Y7H0 255 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 CREB3L3Q68CJ9 461 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 SH3RF2Q8TEC5 729 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 SHISA4Q96DD7 197 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 TMEM169Q96HH4 297 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 WNK4Q96J92 1243 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 CELF4Q9BZC1 486 aaKnown RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 TMX1Q9H3N1 280 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 SMURF1Q9HCE7 757 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 CRTAC1Q9NQ79 661 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 H2AFY2Q9P0M6 372 aaPredicted RBP3.84□□□□□ -1.79
NPM1-209ENST00000521710 KLHL42Q9P2K6 505 aa3.84□□□□□ -1.79
NPM1-209ENST00000521710 ZNF561-AS1K7EIQ3 104 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 MYO1BO43795 1136 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 NRDCO43847 1150 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 F2P00734 622 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 PDE6AP16499 860 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 BPIP17213 487 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 PRKCAP17252 672 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 SDHBP21912 280 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 ADCYAP1R1P41586 468 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 JAM2P57087 298 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 DUSP4Q13115 394 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 STAT4Q14765 748 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 DHCR24Q15392 516 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 PLEKHG6Q3KR16 790 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 BRDTQ58F21 947 aaPredicted RBP3.83□□□□□ -1.8
NPM1-209ENST00000521710 HABP4Q5JVS0 413 aaKnown RBP3.83□□□□□ -1.8
NPM1-209ENST00000521710 SLC23A3Q6PIS1 610 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 DDX46Q7L014 1031 aaKnown RBP3.83□□□□□ -1.8
NPM1-209ENST00000521710 OSTM1Q86WC4 334 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 RBM12BQ8IXT5 1001 aaKnown RBP3.83□□□□□ -1.8
NPM1-209ENST00000521710 SMC1BQ8NDV3 1235 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 PDZD8Q8NEN9 1154 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 NLGN2Q8NFZ4 835 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 PIP4K2CQ8TBX8 421 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 COG1Q8WTW3 980 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 FBXW5Q969U6 566 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 ASIC4Q96FT7 647 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 TRMT2BQ96GJ1 504 aaKnown RBP3.83□□□□□ -1.8
NPM1-209ENST00000521710 ORAI3Q9BRQ5 295 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 TRIM8Q9BZR9 551 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 RXFP1Q9HBX9 757 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 SIT1Q9Y3P8 196 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 X6R8D5 127 aa3.83□□□□□ -1.8
NPM1-209ENST00000521710 B4E1Z4 1266 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 FAM47E-STBD1D6RA91 191 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 H7BY64 318 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 MAN2B1O00754 1011 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 DVL2O14641 736 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 KATNA1O75449 491 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 NPTXRO95502 500 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 HPXP02790 462 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 NTRK1P04629 796 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 PDGFRBP09619 1106 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 GLI4P10075 376 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 ATP2A2P16615 1042 aaKnown RBP3.82□□□□□ -1.8
NPM1-209ENST00000521710 KRT15P19012 456 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 PLCL1Q15111 1095 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 UBE2R2Q712K3 238 aaPredicted RBP3.82□□□□□ -1.8
NPM1-209ENST00000521710 C16orf59Q7L2K0 433 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 DDX53Q86TM3 631 aaKnown RBP3.82□□□□□ -1.8
NPM1-209ENST00000521710 NLRX1Q86UT6 975 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 ANKLE2Q86XL3 938 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 PTRH1Q86Y79 214 aaKnown RBP3.82□□□□□ -1.8
NPM1-209ENST00000521710 SIRT2Q8IXJ6 389 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 RAVER1Q8IY67 606 aaKnown RBP3.82□□□□□ -1.8
NPM1-209ENST00000521710 AHI1Q8N157 1196 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 ANKS4BQ8N8V4 417 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 CHST14Q8NCH0 376 aa3.82□□□□□ -1.8
NPM1-209ENST00000521710 NUP43Q8NFH3 380 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms