RNA–Protein interactions for RNA: ENST00000514404.1

AC008560.1-202, humanhuman

APPRIS ALT2 TSL 4

Gene AC008560.1, Length 332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008560.1-202ENST00000514404 TINF2Q9BSI4 451 aa2.89□□□□□ -1.95
AC008560.1-202ENST00000514404 CDIP1Q9H305 208 aa2.89□□□□□ -1.95
AC008560.1-202ENST00000514404 ST7Q9NRC1 585 aa2.89□□□□□ -1.95
AC008560.1-202ENST00000514404 ACTR10Q9NZ32 417 aa2.89□□□□□ -1.95
AC008560.1-202ENST00000514404 STRIP2Q9ULQ0 834 aa2.89□□□□□ -1.95
AC008560.1-202ENST00000514404 WASF3Q9UPY6 502 aa2.89□□□□□ -1.95
AC008560.1-202ENST00000514404 E9PSI1 815 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 NOP56O00567 594 aaKnown RBP2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 DDAH1O94760 285 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 GJB6O95452 261 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 SSBP05455 408 aaKnown RBP eCLIP2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 SNRPB2P08579 225 aaKnown RBP2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 GFRA1P56159 465 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 CAP1Q01518 475 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 NCAPHQ15003 741 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 CEP68Q76N32 757 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 CABP7Q86V35 215 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 ZNF761Q86XN6 746 aaPredicted RBP2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 MCF2L2Q86YR7 1114 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 LINC00482Q8N8I6 264 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 SLC43A3Q8NBI5 491 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 TMEM145Q8NBT3 493 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 HNRNPLLQ8WVV9 542 aaKnown RBP2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 CPA5Q8WXQ8 436 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 BDH2Q9BUT1 245 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 RBPJLQ9UBG7 517 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 PPARGC1AQ9UBK2 798 aaKnown RBP2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 PRKAG3Q9UGI9 489 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 PALD1Q9ULE6 856 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 PCDHA2Q9Y5H9 948 aa2.88□□□□□ -1.95
AC008560.1-202ENST00000514404 SCG5P05408 212 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 ADRB1P08588 477 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 ZNF143P52747 638 aaPredicted RBP2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 ITGA1P56199 1179 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 SLC9A5Q14940 896 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 ZXDCQ2QGD7 858 aaPredicted RBP2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 CR1LQ2VPA4 569 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 SLC35F1Q5T1Q4 408 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 POMZP3Q6PJE2 187 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 CD300LDQ6UXZ3 194 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 MILR1Q7Z6M3 343 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 VPS37DQ86XT2 251 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 MIB1Q86YT6 1006 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 RBM12BQ8IXT5 1001 aaKnown RBP2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 Q8N1Y9 231 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 NLGN1Q8N2Q7 840 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 ARRDC4Q8NCT1 418 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 DIO2Q92813 273 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 TEPSINQ96N21 525 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 GMLQ99445 158 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 C11orf84Q9BUA3 381 aaPredicted RBP2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 LNPKQ9C0E8 428 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 TIMM13Q9Y5L4 95 aaPredicted RBP2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 X6R8D5 127 aa2.87□□□□□ -1.95
AC008560.1-202ENST00000514404 TRBV23OR9-2A0A075B6M9 112 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 A0A1W2PQU0 124 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 ZBTB7AO95365 584 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 HOXC12P31275 282 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 DNAJA1P31689 397 aaKnown RBP2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 CNR2P34972 360 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 THBS2P35442 1172 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 KCNJ6P48051 423 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 SARSP49591 514 aaKnown RBP2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 RPL11P62913 178 aaKnown RBP2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 PPP2R2AP63151 447 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 PLP2Q04941 152 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 ADAM9Q13443 819 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 PUM1Q14671 1186 aaKnown RBP eCLIP2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 SLC10A6Q3KNW5 377 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 PRR31Q5SQ13 230 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 ZFYVE27Q5T4F4 411 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 PHF19Q5T6S3 580 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 YOD1Q5VVQ6 348 aaPredicted RBP2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 ETV3LQ6ZN32 361 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 PPIL6Q8IXY8 311 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 ADAMTS17Q8TE56 1095 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 TRMT2BQ96GJ1 504 aaKnown RBP2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 ZSWIM3Q96MP5 696 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 JAM3Q9BX67 310 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 LRP2BPQ9P2M1 347 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 NUDT5Q9UKK9 219 aa2.86□□□□□ -1.95
AC008560.1-202ENST00000514404 TCRBV5S2A0A599 114 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 BLACEA4D250 179 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 DDX3XO00571 662 aaKnown RBP eCLIP2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 MEFVO15553 781 aaPredicted RBP2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 KLF4O43474 513 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 DLX3O60479 287 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 LRG1P02750 347 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 CYP2C8P10632 490 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 INSRRP14616 1297 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 MLLT6P55198 1093 aaPredicted RBP2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 EFEMP1Q12805 493 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 GNL2Q13823 731 aaKnown RBP2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 TESK1Q15569 626 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 NTRK3Q16288 839 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 FXNQ16595 210 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 RGL3Q3MIN7 710 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 MCTP2Q6DN12 878 aa2.85□□□□□ -1.95
AC008560.1-202ENST00000514404 KCNT2Q6UVM3 1135 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms