RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 MOXD1Q6UVY6 613 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 FOXD4L3Q6VB84 417 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-230ENST00000511944 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 ELOA2Q8IYF1 753 aaPredicted RBP10.36□□□□□ -0.75
NR1I3-230ENST00000511944 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
NR1I3-230ENST00000511944 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
NR1I3-230ENST00000511944 PSTPIP2Q9H939 334 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 AFG3L2Q9Y4W6 797 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 SRPRBQ9Y5M8 271 aaKnown RBP10.36□□□□□ -0.75
NR1I3-230ENST00000511944 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 SNCAIPQ9Y6H5 919 aa10.36□□□□□ -0.75
NR1I3-230ENST00000511944 CXCL11O14625 94 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 ATP2A1O14983 1001 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 RAD21O60216 631 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-230ENST00000511944 GADD45BO75293 160 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-230ENST00000511944 VCAM1P19320 739 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 SLC16A2P36021 539 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 VGLL4Q14135 290 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-230ENST00000511944 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
NR1I3-230ENST00000511944 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.35□□□□□ -0.75
NR1I3-230ENST00000511944 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 ERO1BQ86YB8 467 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 CHAMP1Q96JM3 812 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 TIGD1Q96MW7 591 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 TMOD4Q9NZQ9 345 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 PCDHA7Q9UN72 937 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 MRPL11Q9Y3B7 192 aaKnown RBP10.35□□□□□ -0.75
NR1I3-230ENST00000511944 RABGAP1Q9Y3P9 1069 aa10.35□□□□□ -0.75
NR1I3-230ENST00000511944 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 ICAM1P05362 532 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 USP11P51784 963 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 SH3BP2P78314 561 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 SPP2Q13103 211 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 PPIL2Q13356 520 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 TKFCQ3LXA3 575 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 LDLRAD1Q5T700 205 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 RESP18Q5W5W9 173 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
NR1I3-230ENST00000511944 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 SPICE1Q8N0Z3 855 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 ZKSCAN4Q969J2 545 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-230ENST00000511944 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
NR1I3-230ENST00000511944 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.75
NR1I3-230ENST00000511944 CPVLQ9H3G5 476 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 SLC38A10Q9HBR0 1119 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 ADAMTS5Q9UNA0 930 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 KCNH4Q9UQ05 1017 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 PCDHB6Q9Y5E3 794 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 PHIPQ8WWQ0 1821 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 LOC285556D6RIA3 1793 aa10.34□□□□□ -0.75
NR1I3-230ENST00000511944 TCHHQ07283 1943 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 SLC26A4O43511 780 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 KINO60870 393 aaKnown RBP10.33□□□□□ -0.76
NR1I3-230ENST00000511944 RGS20O76081 388 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 HOXA7P31268 230 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-230ENST00000511944 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 ZSCAN23Q3MJ62 389 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 LBX2Q6XYB7 198 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 ZNF598Q86UK7 904 aaKnown RBP10.33□□□□□ -0.76
NR1I3-230ENST00000511944 MCF2L2Q86YR7 1114 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 COA7Q96BR5 231 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 AK8Q96MA6 479 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-230ENST00000511944 CLSTN2Q9H4D0 955 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 HOXC10Q9NYD6 342 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 FAM13BQ9NYF5 915 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 USP25Q9UHP3 1055 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 FKBPLQ9UIM3 349 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 FBXO2Q9UK22 296 aaPredicted RBP10.33□□□□□ -0.76
NR1I3-230ENST00000511944 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
NR1I3-230ENST00000511944 OTOFQ9HC10 1997 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms