RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TPD52L2O43399 206 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 ICA1Q05084 483 aa7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 PLCB4Q15147 1175 aa7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 PPP4R3AQ6IN85 833 aa7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 IQCEQ6IPM2 695 aa7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 MB21D2Q8IYB1 491 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 XPO6Q96QU8 1125 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 DNAAF2Q9NVR5 837 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 BZW2Q9Y6E2 419 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-207ENST00000508466 XDHP47989 1333 aa7.96□□□□□ -1.13
LIMCH1-207ENST00000508466 A6NHS1 94 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 HMGB1P1B2RPK0 211 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 CYP27B1O15528 508 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 RARAP10276 462 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 ZAP70P43403 619 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 KIF11P52732 1056 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 NCALDP61601 193 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 KLHDC7AQ5VTJ3 777 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 FOXB2Q5VYV0 432 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 DNAJC1Q96KC8 554 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 TUBGCP2Q9BSJ2 902 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 AGXT2Q9BYV1 514 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 TANGO6Q9C0B7 1094 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 AZI2Q9H6S1 392 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 GALNT8Q9NY28 637 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 STXBP3O00186 592 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 TTI1O43156 1089 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 FESP07332 822 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 GM2AP17900 193 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 PRPHP41219 470 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 SERPINB4P48594 390 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 CFAP221Q4G0U5 840 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 GLE1Q53GS7 698 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 RASIP1Q5U651 963 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 LMOD2Q6P5Q4 547 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 CCDC25Q86WR0 208 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 NGDNQ8NEJ9 315 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 RASGRP4Q8TDF6 673 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 DYDC2Q96IM9 177 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 PUS7Q96PZ0 661 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 ALS2CR12Q96Q35 445 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 ETNK1Q9HBU6 452 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 KCNK9Q9NPC2 374 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 BATF3Q9NR55 127 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 NR2E1Q9Y466 385 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 SLC12A7Q9Y666 1083 aa7.96□□□□□ -1.14
LIMCH1-207ENST00000508466 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 TCP11X1B4DZS4 312 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 HNRNPRO43390 633 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 USO1O60763 962 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 ZNF189O75820 626 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 MSH2P43246 934 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 KCNQ4P56696 695 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 PTGDRQ13258 359 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 CERKLQ49MI3 558 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 DZIP3Q86Y13 1208 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 CSGALNACT2Q8N6G5 542 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 ANKS4BQ8N8V4 417 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 SHISA4Q96DD7 197 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 MRRFQ96E11 262 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 CCDC51Q96ER9 411 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 NOC4LQ9BVI4 516 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 STRN4Q9NRL3 753 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 SAMD15Q9P1V8 674 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 CHMP2BQ9UQN3 213 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 TUBGCP6Q96RT7 1819 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 GPAA1O43292 621 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 DNAJC8O75937 253 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 FCER1AP12319 257 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 CUL3Q13618 768 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 P3H1Q32P28 736 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 GLG1Q92896 1179 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 CAVIN3Q969G5 261 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 RMDN2Q96LZ7 410 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 ZSWIM5Q9P217 1185 aa7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 MAGEC2Q9UBF1 373 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-207ENST00000508466 LRRC53A6NM62 1247 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 MAGEB3O15480 346 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 AHCYL1O43865 530 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ORC4O43929 436 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 HIP1RO75146 1068 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 GH1P01241 217 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 TARSP26639 723 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 INHBCP55103 352 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ROR2Q01974 943 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 PDCD2Q16342 344 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 DBN1Q16643 649 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 OLFML2BQ68BL8 750 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 FITM2Q8N6M3 262 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 EPS8L3Q8TE67 593 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 RPGRIP1Q96KN7 1286 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 FGD4Q96M96 766 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ESF1Q9H501 851 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 SH2D4AQ9H788 454 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 INTS9Q9NV88 658 aaKnown RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 CHORDC1Q9UHD1 332 aaPredicted RBP7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 TBK1Q9UHD2 729 aa7.94□□□□□ -1.14
LIMCH1-207ENST00000508466 ADAMTS1Q9UHI8 967 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms