RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 TRMT2BQ96GJ1 504 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-218ENST00000505009 TRIM55Q9BYV6 548 aa7.38□□□□□ -1.23
UBE2D3-218ENST00000505009 TANGO6Q9C0B7 1094 aa7.38□□□□□ -1.23
UBE2D3-218ENST00000505009 PMF1-BGLAPU3KQ54 211 aa7.38□□□□□ -1.23
UBE2D3-218ENST00000505009 X6R8D5 127 aa7.38□□□□□ -1.23
UBE2D3-218ENST00000505009 ADAMTS20P59510 1910 aa7.38□□□□□ -1.23
UBE2D3-218ENST00000505009 MYO1BO43795 1136 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 MSCO60682 206 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 ZBTB7AO95365 584 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 HTRA3P83110 453 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 FAM26EQ8N5C1 309 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 LINC01356Q8N9X3 169 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 ZNF526Q8TF50 670 aaPredicted RBP7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 DDX11Q96FC9 970 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 TMEM169Q96HH4 297 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 CHAMP1Q96JM3 812 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 AP5M1Q9H0R1 490 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 PALD1Q9ULE6 856 aa7.37□□□□□ -1.23
UBE2D3-218ENST00000505009 A0A0G2JLL6 359 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 PRODHO43272 600 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 C8BP07358 591 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 DLX2Q07687 328 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 MAP4K2Q12851 820 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 USP53Q70EK8 1073 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 SPATC1Q76KD6 591 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 CKAP2LQ8IYA6 745 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 CPA5Q8WXQ8 436 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 KCTD13Q8WZ19 329 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 AARSD1Q9BTE6 412 aaKnown RBP7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 NPFFR2Q9Y5X5 522 aa7.36□□□□□ -1.23
UBE2D3-218ENST00000505009 BLACEA4D250 179 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 OTOL1A6NHN0 477 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 CCDC85CA6NKD9 419 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 GTF2A2P52657 109 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 LSAMPQ13449 338 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 HSP90AA2PQ14568 343 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 NTRK3Q16288 839 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 MROH9Q5TGP6 573 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 LILRA6Q6PI73 481 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 MILR1Q7Z6M3 343 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 RIOX2Q8IUF8 465 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 NLGN1Q8N2Q7 840 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 ST13P5Q8NFI4 369 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 SEC14L1Q92503 715 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 OSBP2Q969R2 916 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 SGSM3Q96HU1 749 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 XYLT2Q9H1B5 865 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 CLDND1Q9NY35 253 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 PPARGC1AQ9UBK2 798 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 MSRB2Q9Y3D2 182 aa7.35□□□□□ -1.23
UBE2D3-218ENST00000505009 ATP2B1P20020 1258 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 SLC6A11P48066 632 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 KCNT2Q6UVM3 1135 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 SAPCD2Q86UD0 394 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 ZDHHC14Q8IZN3 488 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 PHF20Q9BVI0 1012 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 CDIP1Q9H305 208 aa7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 PPP1R1BQ9UD71 204 aaPredicted RBP7.34□□□□□ -1.23
UBE2D3-218ENST00000505009 PABPC1P11940 636 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 GTF2F1P35269 517 aaKnown RBP eCLIP7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 STAT5AP42229 794 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 SMAD4Q13485 552 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 ETV3LQ6ZN32 361 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 STK32CQ86UX6 486 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 MIB1Q86YT6 1006 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 C8orf37Q96NL8 207 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 GORASP1Q9BQQ3 440 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 RAPGEFL1Q9UHV5 662 aa7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 COA3Q9Y2R0 106 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-218ENST00000505009 H7BY64 318 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 SASH1O94885 1247 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 FGFR1P11362 822 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 SLURP1P55000 103 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 CTSWP56202 376 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 CAP1Q01518 475 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 CD300LDQ6UXZ3 194 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 NSMFQ6X4W1 530 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 LIPIQ6XZB0 460 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 ZBTB8AQ96BR9 441 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 SPATA25Q9BR10 227 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 JAM3Q9BX67 310 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 SPATA6Q9NWH7 488 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 PFDN2Q9UHV9 154 aa7.32□□□□□ -1.24
UBE2D3-218ENST00000505009 IQCA1LA6NCM1 817 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 U2SURPO15042 1029 aaKnown RBP7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 PDPK1O15530 556 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 CYP2C8P10632 490 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 ARRDC4Q8NCT1 418 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 ADAM7Q9H2U9 754 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 GPR27Q9NS67 375 aa7.31□□□□□ -1.24
UBE2D3-218ENST00000505009 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
UBE2D3-218ENST00000505009 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
UBE2D3-218ENST00000505009 ADCY3O60266 1144 aa7.3□□□□□ -1.24
UBE2D3-218ENST00000505009 DIAPH1O60610 1272 aaKnown RBP7.3□□□□□ -1.24
UBE2D3-218ENST00000505009 STEAP3Q658P3 488 aa7.3□□□□□ -1.24
UBE2D3-218ENST00000505009 FAM126BQ8IXS8 530 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms