RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 RMDN3Q96TC7 470 aa16.52■□□□□ 0.24
POLR2J3-207ENST00000503564 JMJD4Q9H9V9 463 aa16.52■□□□□ 0.24
POLR2J3-207ENST00000503564 CERS4Q9HA82 394 aa16.52■□□□□ 0.24
POLR2J3-207ENST00000503564 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
POLR2J3-207ENST00000503564 MTCH2Q9Y6C9 303 aa16.52■□□□□ 0.24
POLR2J3-207ENST00000503564 TRANK1O15050 2925 aa16.52■□□□□ 0.23
POLR2J3-207ENST00000503564 OPLAHO14841 1288 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 GHRHRQ02643 423 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 NUCB1Q02818 461 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 TFF2Q03403 129 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 AAMPQ13685 434 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 STXBP2Q15833 593 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 DSCC1Q9BVC3 393 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 ZSWIM5Q9P217 1185 aa16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 DDX41Q9UJV9 622 aaKnown RBP16.51■□□□□ 0.23
POLR2J3-207ENST00000503564 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 BMP1P13497 986 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 KRT40Q6A162 431 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 SPRED2Q7Z698 418 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 FBXO11Q86XK2 927 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 NECAB3Q96P71 396 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 GTF2IRD1Q9UHL9 959 aa16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
POLR2J3-207ENST00000503564 SIP14410 1827 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 GTPBP6O43824 516 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 F2P00734 622 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 IGHDP01880 384 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 CXCL10P02778 98 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 SELPP16109 830 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 COL9A1P20849 921 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 HSD17B4P51659 736 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 WDR5P61964 334 aaKnown RBP16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 DGKDQ16760 1214 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 ARHGEF16Q5VV41 709 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 LRRC8DQ7L1W4 858 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 CHST3Q7LGC8 479 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 IL25Q9H293 177 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
POLR2J3-207ENST00000503564 BRWD1Q9NSI6 2320 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 MICAL3Q7RTP6 2002 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 KIF28PB7ZC32 967 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 HAS3O00219 553 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 HIP1O00291 1037 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 LPXNO60711 386 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 PPP1R11O60927 126 aaPredicted RBP16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 NBNO60934 754 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 NR3C2P08235 984 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 PSEN2P49810 448 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 KCNQ1P51787 676 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 DEFB103AP81534 67 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 SEC23AQ15436 765 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 PPTC7Q8NI37 304 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 KRT23Q9C075 422 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
POLR2J3-207ENST00000503564 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 BDP1A6H8Y1 2624 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 LCHNA4D1U4 455 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 RBAK-RBAKDNI3L0D1 243 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 RGS20O76081 388 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 CFBP00751 764 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 ZNF286BP0CG31 522 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 CKBP12277 381 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 KCNJ6P48051 423 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 GRB10Q13322 594 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 MFSD10Q14728 455 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 TRIM71Q2Q1W2 868 aaKnown RBP16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 WNT8BQ93098 351 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 PDCD2LQ9BRP1 358 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 AMNQ9BXJ7 453 aa16.47■□□□□ 0.23
POLR2J3-207ENST00000503564 TLL1O43897 1013 aa16.46■□□□□ 0.23
POLR2J3-207ENST00000503564 PARNO95453 639 aaKnown RBP16.46■□□□□ 0.23
POLR2J3-207ENST00000503564 LAMC2Q13753 1193 aa16.46■□□□□ 0.23
POLR2J3-207ENST00000503564 MBTPS1Q14703 1052 aa16.46■□□□□ 0.23
POLR2J3-207ENST00000503564 SKIV2LQ15477 1246 aaKnown RBP16.46■□□□□ 0.23
POLR2J3-207ENST00000503564 AAK1Q2M2I8 961 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms