RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 IKBKEQ14164 716 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 MBTPS1Q14703 1052 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 TRIM71Q2Q1W2 868 aaKnown RBP18.41■□□□□ 0.54
HDAC6-236ENST00000498808 PUS10Q3MIT2 529 aaKnown RBP18.41■□□□□ 0.54
HDAC6-236ENST00000498808 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC6-236ENST00000498808 ANKS1AQ92625 1134 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 WNT8BQ93098 351 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
HDAC6-236ENST00000498808 RANBP6O60518 1105 aaKnown RBP18.4■□□□□ 0.54
HDAC6-236ENST00000498808 ZP2Q05996 745 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
HDAC6-236ENST00000498808 LY6KQ17RY6 165 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 ZMYM1Q5SVZ6 1142 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 GPATCH3Q96I76 525 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 SNX27Q96L92 541 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 INSL6Q9Y581 213 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 WDR19Q8NEZ3 1342 aa18.4■□□□□ 0.54
HDAC6-236ENST00000498808 GH1P01241 217 aa18.39■□□□□ 0.53
HDAC6-236ENST00000498808 HTRA4P83105 476 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-236ENST00000498808 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
HDAC6-236ENST00000498808 SP7Q8TDD2 431 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-236ENST00000498808 TMEM47Q9BQJ4 181 aa18.39■□□□□ 0.53
HDAC6-236ENST00000498808 MYO7AQ13402 2215 aa18.39■□□□□ 0.53
HDAC6-236ENST00000498808 KIAA1217Q5T5P2 1943 aa18.39■□□□□ 0.53
HDAC6-236ENST00000498808 C19orf67A6NJJ6 358 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 ORC4O43929 436 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 PDHBP11177 359 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
HDAC6-236ENST00000498808 CASTP20810 708 aaKnown RBP18.38■□□□□ 0.53
HDAC6-236ENST00000498808 PSEN2P49810 448 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 PTK7Q13308 1070 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 COL19A1Q14993 1142 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 EPC2Q52LR7 807 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 TIGD5Q53EQ6 642 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 HFE2Q6ZVN8 426 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 CHST3Q7LGC8 479 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
HDAC6-236ENST00000498808 ALG1Q9BT22 464 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 ANAPC4Q9UJX5 808 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 PNMA2Q9UL42 364 aa18.38■□□□□ 0.53
HDAC6-236ENST00000498808 B4DLN1 442 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 LGR5O75473 907 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 FGRP09769 529 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
HDAC6-236ENST00000498808 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
HDAC6-236ENST00000498808 PTPROQ16827 1216 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 TCEAL5Q5H9L2 206 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 C7orf31Q8N865 590 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 BANK1Q8NDB2 785 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 DBF4BQ8NFT6 615 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 PRKAG3Q9UGI9 489 aa18.37■□□□□ 0.53
HDAC6-236ENST00000498808 HAS3O00219 553 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 ZNF543Q08ER8 600 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 HIC1Q14526 733 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 DGKDQ16760 1214 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 VPS53Q5VIR6 699 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 TBC1D5Q92609 795 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 CHMP4BQ9H444 224 aaKnown RBP18.36■□□□□ 0.53
HDAC6-236ENST00000498808 COL20A1Q9P218 1284 aa18.36■□□□□ 0.53
HDAC6-236ENST00000498808 ATG2AQ2TAZ0 1938 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 NLRC5Q86WI3 1866 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 H3BNC9 293 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 F2P00734 622 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 AMHP03971 560 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 ZNF286BP0CG31 522 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 IRS1P35568 1242 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 GPM6BQ13491 265 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 MFSD10Q14728 455 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 USH1GQ495M9 461 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 EP400NLQ6ZTU2 488 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 ADHFE1Q8IWW8 467 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 SAMD11Q96NU1 681 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 TAAR1Q96RJ0 339 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 PHOX2BQ99453 314 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 TECTAO75443 2155 aa18.35■□□□□ 0.53
HDAC6-236ENST00000498808 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
HDAC6-236ENST00000498808 SYTL5Q8TDW5 730 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-236ENST00000498808 EMID1Q96A84 441 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-236ENST00000498808 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
HDAC6-236ENST00000498808 NSUN3Q9H649 340 aaKnown RBP18.34■□□□□ 0.53
HDAC6-236ENST00000498808 DCTPP1Q9H773 170 aa18.34■□□□□ 0.53
HDAC6-236ENST00000498808 TCP11L1Q9NUJ3 509 aa18.34■□□□□ 0.53
HDAC6-236ENST00000498808 DDX41Q9UJV9 622 aaKnown RBP18.34■□□□□ 0.53
HDAC6-236ENST00000498808 FAM50BQ9Y247 325 aa18.34■□□□□ 0.53
HDAC6-236ENST00000498808 COL4A6Q14031 1691 aa18.34■□□□□ 0.53
HDAC6-236ENST00000498808 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.53
HDAC6-236ENST00000498808 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
HDAC6-236ENST00000498808 LTBRP36941 435 aa18.33■□□□□ 0.52
HDAC6-236ENST00000498808 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
HDAC6-236ENST00000498808 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.52
HDAC6-236ENST00000498808 FBXO11Q86XK2 927 aa18.33■□□□□ 0.52
HDAC6-236ENST00000498808 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms