RNA–Protein interactions for RNA: ENST00000496821.5

ABCB1-209, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 913 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-209ENST00000496821 GPNMBQ14956 572 aa18.77■□□□□ 0.6
ABCB1-209ENST00000496821 SLC35G1Q2M3R5 365 aa18.77■□□□□ 0.6
ABCB1-209ENST00000496821 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
ABCB1-209ENST00000496821 GDF6Q6KF10 455 aaPredicted RBP18.77■□□□□ 0.6
ABCB1-209ENST00000496821 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
ABCB1-209ENST00000496821 VAT1LQ9HCJ6 419 aa18.77■□□□□ 0.6
ABCB1-209ENST00000496821 MAD2L2Q9UI95 211 aa18.77■□□□□ 0.6
ABCB1-209ENST00000496821 MYH6P13533 1939 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 DHX16O60231 1041 aaKnown RBP18.76■□□□□ 0.59
ABCB1-209ENST00000496821 EIF3JO75822 258 aaKnown RBP18.76■□□□□ 0.59
ABCB1-209ENST00000496821 CA3P07451 260 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 NR3C2P08235 984 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
ABCB1-209ENST00000496821 PDE4AP27815 886 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 RBL2Q08999 1139 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 PTGISQ16647 500 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 ARHGEF16Q5VV41 709 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 RETREG2Q8NC44 543 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 PHOSPHO2Q8TCD6 241 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 DHX38Q92620 1227 aaKnown RBP18.76■□□□□ 0.59
ABCB1-209ENST00000496821 YTHDC1Q96MU7 727 aaKnown RBP18.76■□□□□ 0.59
ABCB1-209ENST00000496821 ASB2Q96Q27 587 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 SLC9A7Q96T83 725 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 AMNQ9BXJ7 453 aa18.76■□□□□ 0.59
ABCB1-209ENST00000496821 KLRF2D3W0D1 207 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 RGS20O76081 388 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 ARHGEF15O94989 841 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 CFBP00751 764 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 ACTN1P12814 892 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 CCDC85BQ15834 202 aaPredicted RBP18.75■□□□□ 0.59
ABCB1-209ENST00000496821 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 GTF2IRD1Q9UHL9 959 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 NOD1Q9Y239 953 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 BDP1A6H8Y1 2624 aa18.75■□□□□ 0.59
ABCB1-209ENST00000496821 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
ABCB1-209ENST00000496821 EPOPA6NHQ4 379 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 HAS3O00219 553 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 ZBTB5O15062 677 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 F2P00734 622 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 HOXD8P13378 290 aaPredicted RBP18.74■□□□□ 0.59
ABCB1-209ENST00000496821 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
ABCB1-209ENST00000496821 CHMP4BP1P59074 171 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 DGKDQ16760 1214 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 TTC22Q5TAA0 569 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 STOX1Q6ZVD7 989 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 CHST3Q7LGC8 479 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 HERC6Q8IVU3 1022 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 PPTC7Q8NI37 304 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 AFAP1L1Q8TED9 768 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 PDCD2LQ9BRP1 358 aa18.74■□□□□ 0.59
ABCB1-209ENST00000496821 BAIAP3O94812 1187 aa18.73■□□□□ 0.59
ABCB1-209ENST00000496821 POU3F3P20264 500 aaPredicted RBP18.73■□□□□ 0.59
ABCB1-209ENST00000496821 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
ABCB1-209ENST00000496821 FTOQ9C0B1 505 aaKnown RBP eCLIP18.73■□□□□ 0.59
ABCB1-209ENST00000496821 MAP3K20Q9NYL2 800 aaKnown RBP18.73■□□□□ 0.59
ABCB1-209ENST00000496821 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
ABCB1-209ENST00000496821 NCOR1O75376 2440 aa18.73■□□□□ 0.59
ABCB1-209ENST00000496821 TRIP12Q14669 1992 aaPredicted RBP18.72■□□□□ 0.59
ABCB1-209ENST00000496821 PRRC2BQ5JSZ5 2229 aaKnown RBP18.72■□□□□ 0.59
ABCB1-209ENST00000496821 TNFRSF10AO00220 468 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 CYP21A2P08686 494 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 SELPP16109 830 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 MRPS5P82675 430 aaKnown RBP18.72■□□□□ 0.59
ABCB1-209ENST00000496821 TAP1Q03518 808 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 LAMC2Q13753 1193 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 GRM4Q14833 912 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 LRRC8DQ7L1W4 858 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 SAMD3Q8N6K7 520 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 CCDC155Q8N6L0 562 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 RIOX1Q9H6W3 641 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 SENP2Q9HC62 589 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 MTCH2Q9Y6C9 303 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 PTPRSQ13332 1948 aa18.72■□□□□ 0.59
ABCB1-209ENST00000496821 RFXAPO00287 272 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 CYTH3O43739 400 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 NBNO60934 754 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 CXCL10P02778 98 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 ZNF286BP0CG31 522 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 CKBP12277 381 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 HOXA13P31271 388 aaPredicted RBP18.71■□□□□ 0.59
ABCB1-209ENST00000496821 PSEN2P49810 448 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 WDR5P61964 334 aaKnown RBP18.71■□□□□ 0.59
ABCB1-209ENST00000496821 PTH1RQ03431 593 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 MFSD10Q14728 455 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 PGM5Q15124 567 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
ABCB1-209ENST00000496821 MYSM1Q5VVJ2 828 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 TRAF7Q6Q0C0 670 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 VSIG10LQ86VR7 867 aa18.71■□□□□ 0.59
ABCB1-209ENST00000496821 SP2Q02086 613 aa18.7■□□□□ 0.58
ABCB1-209ENST00000496821 HIC1Q14526 733 aa18.7■□□□□ 0.58
ABCB1-209ENST00000496821 KIAA0753Q2KHM9 967 aa18.7■□□□□ 0.58
ABCB1-209ENST00000496821 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
ABCB1-209ENST00000496821 CELF3Q5SZQ8 465 aaKnown RBP18.7■□□□□ 0.58
ABCB1-209ENST00000496821 SPRED2Q7Z698 418 aa18.7■□□□□ 0.58
ABCB1-209ENST00000496821 DHX37Q8IY37 1157 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms