RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CYB5R4Q7L1T6 521 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 CCDC155Q8N6L0 562 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 EMID1Q96A84 441 aaPredicted RBP27.04■■□□□ 1.92
COL27A1-208ENST00000494780 PRDM6Q9NQX0 595 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 MAD2L2Q9UI95 211 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 PRUNE2Q8WUY3 3088 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 OPLAHO14841 1288 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 ZBTB5O15062 677 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 GSPT1P15170 499 aaKnown RBP27.03■■□□□ 1.92
COL27A1-208ENST00000494780 PDE4AP27815 886 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 DGKDQ16760 1214 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 TMEM67Q5HYA8 995 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 CHST3Q7LGC8 479 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 SAMD3Q8N6K7 520 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 CAGE1Q8TC20 777 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 PHOSPHO2Q8TCD6 241 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 KAT2BQ92831 832 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 SLC9A7Q96T83 725 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 TANC1Q9C0D5 1861 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 CHD9Q3L8U1 2897 aa27.03■■□□□ 1.92
COL27A1-208ENST00000494780 PALM3A6NDB9 673 aaPredicted RBP27.02■■□□□ 1.92
COL27A1-208ENST00000494780 AFAP1L1Q8TED9 768 aa27.02■■□□□ 1.92
COL27A1-208ENST00000494780 ATXN2LQ8WWM7 1075 aaKnown RBP27.02■■□□□ 1.92
COL27A1-208ENST00000494780 RUFY2Q8WXA3 655 aa27.02■■□□□ 1.92
COL27A1-208ENST00000494780 FTOQ9C0B1 505 aaKnown RBP eCLIP27.02■■□□□ 1.923e-6■■■□□ 14.9
COL27A1-208ENST00000494780 MRVI1Q9Y6F6 885 aa27.02■■□□□ 1.92
COL27A1-208ENST00000494780 TTC28Q96AY4 2481 aa27.02■■□□□ 1.92
COL27A1-208ENST00000494780 PPP1R11O60927 126 aaPredicted RBP27.01■■□□□ 1.91
COL27A1-208ENST00000494780 TRAF1Q13077 416 aa27.01■■□□□ 1.91
COL27A1-208ENST00000494780 LAMC2Q13753 1193 aa27.01■■□□□ 1.91
COL27A1-208ENST00000494780 GDF6Q6KF10 455 aaPredicted RBP27.01■■□□□ 1.91
COL27A1-208ENST00000494780 THEGQ9P2T0 379 aa27.01■■□□□ 1.91
COL27A1-208ENST00000494780 PCDHA1Q9Y5I3 950 aa27.01■■□□□ 1.91
COL27A1-208ENST00000494780 U3KPZ7 1027 aaPredicted RBP27.01■■□□□ 1.91
COL27A1-208ENST00000494780 VCANP13611 3396 aa27.01■■□□□ 1.91
COL27A1-208ENST00000494780 CCDC85BQ15834 202 aaPredicted RBP27■■□□□ 1.91
COL27A1-208ENST00000494780 STOX1Q6ZVD7 989 aa27■■□□□ 1.91
COL27A1-208ENST00000494780 PPTC7Q8NI37 304 aa27■■□□□ 1.91
COL27A1-208ENST00000494780 CTAGE1Q96RT6 745 aa27■■□□□ 1.91
COL27A1-208ENST00000494780 PDCD2LQ9BRP1 358 aa27■■□□□ 1.91
COL27A1-208ENST00000494780 KATNAL1Q9BW62 490 aa27■■□□□ 1.91
COL27A1-208ENST00000494780 BAIAP3O94812 1187 aa26.99■■□□□ 1.91
COL27A1-208ENST00000494780 CYP21A2P08686 494 aa26.99■■□□□ 1.91
COL27A1-208ENST00000494780 GRM4Q14833 912 aa26.99■■□□□ 1.91
COL27A1-208ENST00000494780 KCNV1Q6PIU1 500 aa26.99■■□□□ 1.91
COL27A1-208ENST00000494780 DHX37Q8IY37 1157 aaKnown RBP26.99■■□□□ 1.91
COL27A1-208ENST00000494780 GTF2IRD1Q9UHL9 959 aa26.99■■□□□ 1.91
COL27A1-208ENST00000494780 SPTBN5Q9NRC6 3674 aaKnown RBP26.98■■□□□ 1.91
COL27A1-208ENST00000494780 CA3P07451 260 aa26.98■■□□□ 1.91
COL27A1-208ENST00000494780 SELPP16109 830 aa26.98■■□□□ 1.91
COL27A1-208ENST00000494780 PSEN2P49810 448 aa26.98■■□□□ 1.91
COL27A1-208ENST00000494780 RBL2Q08999 1139 aa26.98■■□□□ 1.91
COL27A1-208ENST00000494780 C7orf31Q8N865 590 aa26.98■■□□□ 1.91
COL27A1-208ENST00000494780 RIOX1Q9H6W3 641 aa26.98■■□□□ 1.91
COL27A1-208ENST00000494780 ERICH2A1L162 156 aa26.97■■□□□ 1.91
COL27A1-208ENST00000494780 IFIT3O14879 490 aaKnown RBP26.97■■□□□ 1.91
COL27A1-208ENST00000494780 PARNO95453 639 aaKnown RBP26.97■■□□□ 1.91
COL27A1-208ENST00000494780 F2P00734 622 aa26.97■■□□□ 1.91
COL27A1-208ENST00000494780 MYCLP12524 364 aaPredicted RBP26.97■■□□□ 1.91
COL27A1-208ENST00000494780 CHMLP26374 656 aa26.97■■□□□ 1.91
COL27A1-208ENST00000494780 VSIG10LQ86VR7 867 aa26.97■■□□□ 1.91
COL27A1-208ENST00000494780 HERC6Q8IVU3 1022 aa26.97■■□□□ 1.91
COL27A1-208ENST00000494780 HDAC6Q9UBN7 1215 aa26.97■■□□□ 1.91
COL27A1-208ENST00000494780 KIF28PB7ZC32 967 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 HAS3O00219 553 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 RGS20O76081 388 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 HOXD8P13378 290 aaPredicted RBP26.96■■□□□ 1.91
COL27A1-208ENST00000494780 HOXA13P31271 388 aaPredicted RBP26.96■■□□□ 1.91
COL27A1-208ENST00000494780 PTH1RQ03431 593 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 MFSD10Q14728 455 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 PGM5Q15124 567 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 SLC35G1Q2M3R5 365 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 LRRC8DQ7L1W4 858 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 RALYLQ86SE5 291 aaKnown RBP26.96■■□□□ 1.91
COL27A1-208ENST00000494780 HOMER1Q86YM7 354 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 DHX38Q92620 1227 aaKnown RBP26.96■■□□□ 1.91
COL27A1-208ENST00000494780 ASB2Q96Q27 587 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 PIGSQ96S52 555 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 ALG1Q9BT22 464 aa26.96■■□□□ 1.91
COL27A1-208ENST00000494780 GCOM1H8Y6P7 765 aaPredicted RBP26.95■■□□□ 1.9
COL27A1-208ENST00000494780 PPFIA4O75335 1185 aa26.95■■□□□ 1.9
COL27A1-208ENST00000494780 POLR2MP0CAP2 368 aa26.95■■□□□ 1.9
COL27A1-208ENST00000494780 KCNJ6P48051 423 aa26.95■■□□□ 1.9
COL27A1-208ENST00000494780 MRPS5P82675 430 aaKnown RBP26.95■■□□□ 1.9
COL27A1-208ENST00000494780 SART3Q15020 963 aaKnown RBP26.95■■□□□ 1.9
COL27A1-208ENST00000494780 MYSM1Q5VVJ2 828 aa26.95■■□□□ 1.9
COL27A1-208ENST00000494780 NCOA7Q8NI08 942 aa26.95■■□□□ 1.9
COL27A1-208ENST00000494780 TSPYL2Q9H2G4 693 aaPredicted RBP26.95■■□□□ 1.9
COL27A1-208ENST00000494780 SUPT16HQ9Y5B9 1047 aaKnown RBP26.95■■□□□ 1.9
COL27A1-208ENST00000494780 TRIP12Q14669 1992 aaPredicted RBP26.95■■□□□ 1.9
COL27A1-208ENST00000494780 ZNF286BP0CG31 522 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 TGFB3P10600 412 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 POU3F3P20264 500 aaPredicted RBP26.94■■□□□ 1.9
COL27A1-208ENST00000494780 TROAPQ12815 778 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 GPNMBQ14956 572 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 WTAPQ15007 396 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 KIAA0753Q2KHM9 967 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 CELF3Q5SZQ8 465 aaKnown RBP26.94■■□□□ 1.9
COL27A1-208ENST00000494780 TET1Q8NFU7 2136 aa26.94■■□□□ 1.9
COL27A1-208ENST00000494780 PNMA6FA0A0J9YX94 578 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms