RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ANO2Q9NQ90 1003 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 PXMP2Q9NR77 195 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 UNC80Q8N2C7 3258 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 GBF1Q92538 1859 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 PRC1O43663 620 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 RXRAP19793 462 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 HSD17B4P51659 736 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 SMAD3P84022 425 aaKnown RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 CASC1Q6TDU7 716 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 NFXL1Q6ZNB6 911 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 CMTR1Q8N1G2 835 aaKnown RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 CDX2Q99626 313 aaPredicted RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 NOC4LQ9BVI4 516 aaKnown RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 MAF1Q9H063 256 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 TTYH1Q9H313 450 aaPredicted RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 LY9Q9HBG7 655 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 IL23AQ9NPF7 189 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 DDX41Q9UJV9 622 aaKnown RBP11.13□□□□□ -0.63
MSH5-218ENST00000494646 STXBP5LQ9Y2K9 1186 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 SCN10AQ9Y5Y9 1956 aa11.13□□□□□ -0.63
MSH5-218ENST00000494646 DOCK5Q9H7D0 1870 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 GCOM1H8Y6P7 765 aaPredicted RBP11.12□□□□□ -0.63
MSH5-218ENST00000494646 KPNA6O60684 536 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 GH1P01241 217 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 FGBP02675 491 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 POLR2MP0CAP2 368 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 MCM5P33992 734 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 ARHGAP1Q07960 439 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 NECTIN1Q15223 517 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 CENPQQ7L2Z9 268 aaPredicted RBP11.12□□□□□ -0.63
MSH5-218ENST00000494646 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 PDCD2LQ9BRP1 358 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 SEZ6LQ9BYH1 1024 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 WNT8AQ9H1J5 351 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 MRVI1Q9Y6F6 885 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 SPTBN5Q9NRC6 3674 aaKnown RBP11.12□□□□□ -0.63
MSH5-218ENST00000494646 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
MSH5-218ENST00000494646 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 SH2B2O14492 632 aaPredicted RBP11.11□□□□□ -0.63
MSH5-218ENST00000494646 RGS20O76081 388 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 MMP3P08254 477 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 PBX2P40425 430 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 PGM5Q15124 567 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 DEFB128Q7Z7B8 93 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 VSIG10LQ86VR7 867 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 DHX37Q8IY37 1157 aaKnown RBP11.11□□□□□ -0.63
MSH5-218ENST00000494646 IL31RAQ8NI17 732 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
MSH5-218ENST00000494646 MYLIPQ8WY64 445 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
MSH5-218ENST00000494646 MAP3K20Q9NYL2 800 aaKnown RBP11.11□□□□□ -0.63
MSH5-218ENST00000494646 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
MSH5-218ENST00000494646 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
MSH5-218ENST00000494646 hCG_1642624A0A1W2PR95 340 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 PLEKHA8P1O95397 391 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 SUPT20HL2P0C7V6 817 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
MSH5-218ENST00000494646 SP2Q02086 613 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 GHRHRQ02643 423 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 TRAF1Q13077 416 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 BMP2KLQ5H9B9 411 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 PSRC1Q6PGN9 363 aaPredicted RBP11.1□□□□□ -0.63
MSH5-218ENST00000494646 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
MSH5-218ENST00000494646 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 SRBD1Q8N5C6 995 aaKnown RBP11.1□□□□□ -0.63
MSH5-218ENST00000494646 KAT2BQ92831 832 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
MSH5-218ENST00000494646 CHD9Q3L8U1 2897 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 ZBBXA8MT70 800 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 GGPS1O95749 300 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 DNAJB2P25686 324 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 CCND2P30279 289 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 KIF5BP33176 963 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 GRIN2CQ14957 1233 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 PTGISQ16647 500 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 DGKDQ16760 1214 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 RASIP1Q5U651 963 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 GDF6Q6KF10 455 aaPredicted RBP11.09□□□□□ -0.63
MSH5-218ENST00000494646 NFRKBQ6P4R8 1299 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 SAMD3Q8N6K7 520 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
MSH5-218ENST00000494646 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
MSH5-218ENST00000494646 MAP3K14Q99558 947 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms