RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 HOMER2Q9NSB8 354 aa7.32□□□□□ -1.24
BRD9-211ENST00000494422 PCDHA4Q9UN74 947 aa7.32□□□□□ -1.24
BRD9-211ENST00000494422 RBBP6Q7Z6E9 1792 aaKnown RBP7.32□□□□□ -1.24
BRD9-211ENST00000494422 PLXNB2O15031 1838 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 FRMPD4Q14CM0 1322 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 CEP350Q5VT06 3117 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 NFIBO00712 420 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 MEIS2O14770 477 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 TRIM66O15016 1216 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 ADCY3O60266 1144 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 MSCO60682 206 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 FDPSP14324 419 aaKnown RBP7.31□□□□□ -1.24
BRD9-211ENST00000494422 CTGFP29279 349 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 GRK4P32298 578 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 ANP32AP39687 249 aaKnown RBP7.31□□□□□ -1.24
BRD9-211ENST00000494422 SLC4A3P48751 1232 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 CLK2P49760 499 aaKnown RBP7.31□□□□□ -1.24
BRD9-211ENST00000494422 SNAP25P60880 206 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 PRKCZQ05513 592 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 STXBP2Q15833 593 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 GNPTABQ3T906 1256 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 KRT25Q7Z3Z0 450 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 BLIDQ8IZY5 108 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 REXO1Q8N1G1 1221 aaKnown RBP7.31□□□□□ -1.24
BRD9-211ENST00000494422 FBXO18Q8NFZ0 1043 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 SYTL5Q8TDW5 730 aaPredicted RBP7.31□□□□□ -1.24
BRD9-211ENST00000494422 MAML3Q96JK9 1138 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 CDHR1Q96JP9 859 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 C8orf76Q96K31 380 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 TINF2Q9BSI4 451 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 ABHD16BQ9H3Z7 469 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 TSKSQ9UJT2 592 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 CNPY2Q9Y2B0 182 aa7.31□□□□□ -1.24
BRD9-211ENST00000494422 OPLAHO14841 1288 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 NKRFO15226 690 aaKnown RBP eCLIP7.3□□□□□ -1.24
BRD9-211ENST00000494422 COBLO75128 1261 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 EIF3JO75822 258 aaKnown RBP7.3□□□□□ -1.24
BRD9-211ENST00000494422 CD2BP2O95400 341 aaKnown RBP7.3□□□□□ -1.24
BRD9-211ENST00000494422 IGHA2P01877 340 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 MMP1P03956 469 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 TGFB3P10600 412 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 CYP2B6P20813 491 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 EDNRBP24530 442 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 GJB2P29033 226 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 CCND2P30279 289 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 KRT2P35908 639 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 ALDH5A1P51649 535 aaPredicted RBP7.3□□□□□ -1.24
BRD9-211ENST00000494422 USP11P51784 963 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 ST3GAL1Q11201 340 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 ORC2Q13416 577 aaPredicted RBP7.3□□□□□ -1.24
BRD9-211ENST00000494422 SLC9C1Q4G0N8 1177 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 ARHGEF16Q5VV41 709 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 PCNX4Q63HM2 1172 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 MOXD1Q6UVY6 613 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 PIBF1Q8WXW3 757 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 GPKOWQ92917 476 aaPredicted RBP eCLIP7.3□□□□□ -1.24
BRD9-211ENST00000494422 RMDN3Q96TC7 470 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 PDCD2LQ9BRP1 358 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 ARHGAP39Q9C0H5 1083 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 FOXP1Q9H334 677 aaPredicted RBP7.3□□□□□ -1.24
BRD9-211ENST00000494422 VTA1Q9NP79 307 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 PXMP2Q9NR77 195 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 VPS54Q9P1Q0 977 aa7.3□□□□□ -1.24
BRD9-211ENST00000494422 RPTORQ8N122 1335 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 BAZ2BQ9UIF8 2168 aaKnown RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 ZNFX1Q9P2E3 1918 aaKnown RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 CCDC194A0A1B0GVG4 234 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 hCG_1642624A0A1W2PR95 340 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 H3BQV1 296 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 M0R2N6 131 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 PEX10O60683 326 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 PGK2P07205 417 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 NR3C2P08235 984 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 CYP3A4P08684 503 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 GCFC2P16383 781 aaKnown RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 SREBF1P36956 1147 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 TRAPPC10P48553 1259 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 LSM11P83369 360 aaKnown RBP eCLIP7.29□□□□□ -1.24
BRD9-211ENST00000494422 SETQ01105 290 aaPredicted RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 GNL2Q13823 731 aaKnown RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 NONOQ15233 471 aaKnown RBP eCLIP7.29□□□□□ -1.245e-7■■■□□ 19.1
BRD9-211ENST00000494422 MAP3K21Q5TCX8 1036 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 LARP1BQ659C4 914 aaKnown RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 KRT40Q6A162 431 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 SLC30A10Q6XR72 485 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 ARMCX2Q7L311 632 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 NIPA1Q7RTP0 329 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 NLRX1Q86UT6 975 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 VSIG10LQ86VR7 867 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 GIMAP8Q8ND71 665 aaPredicted RBP7.29□□□□□ -1.24
BRD9-211ENST00000494422 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 ARMC5Q96C12 935 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 GPRASP2Q96D09 838 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 FAM117AQ9C073 453 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 PCDHA6Q9UN73 950 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 Q9Y3F1 56 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 PCDHA8Q9Y5H6 950 aa7.29□□□□□ -1.24
BRD9-211ENST00000494422 PTCH2Q9Y6C5 1203 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms