RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 COG5Q9UP83 839 aa14.43□□□□□ -0.1
SAMM50-205ENST00000493621 LCHNA4D1U4 455 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 ZNF213O14771 459 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 SELPP16109 830 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 CASTP20810 708 aaKnown RBP14.42□□□□□ -0.1
SAMM50-205ENST00000493621 MFAP1P55081 439 aaKnown RBP14.42□□□□□ -0.1
SAMM50-205ENST00000493621 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
SAMM50-205ENST00000493621 WDR5P61964 334 aaKnown RBP14.42□□□□□ -0.1
SAMM50-205ENST00000493621 GPNMBQ14956 572 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 STXBP2Q15833 593 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 LRRC8DQ7L1W4 858 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 SESTD1Q86VW0 696 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 DHX38Q92620 1227 aaKnown RBP14.42□□□□□ -0.1
SAMM50-205ENST00000493621 RMDN3Q96TC7 470 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 ZBED2Q9BTP6 218 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 KAT14Q9H8E8 782 aa14.42□□□□□ -0.1
SAMM50-205ENST00000493621 SIP14410 1827 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 DHX16O60231 1041 aaKnown RBP14.41□□□□□ -0.1
SAMM50-205ENST00000493621 LPXNO60711 386 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 KDM4AO75164 1064 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 EIF2AK2P19525 551 aaKnown RBP14.41□□□□□ -0.1
SAMM50-205ENST00000493621 DEFB103AP81534 67 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 HDAC1Q13547 482 aaPredicted RBP14.41□□□□□ -0.1
SAMM50-205ENST00000493621 DGKDQ16760 1214 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 CCDC178Q5BJE1 867 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 ARHGEF16Q5VV41 709 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 CNKSR3Q6P9H4 555 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 IQCA1Q86XH1 822 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 MCF2L2Q86YR7 1114 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 C7orf31Q8N865 590 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 HLA-CQ95604 372 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 IWS1Q96ST2 819 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 ALG1Q9BT22 464 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 C1QTNF1Q9BXJ1 281 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 LNPKQ9C0E8 428 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 MAF1Q9H063 256 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 VAT1LQ9HCJ6 419 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 GTF2IRD1Q9UHL9 959 aa14.41□□□□□ -0.1
SAMM50-205ENST00000493621 B4E1Z4 1266 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 RBAK-RBAKDNI3L0D1 243 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 NBNO60934 754 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 CKBP12277 381 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 SDSP20132 328 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 PSEN2P49810 448 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 TCTN1Q2MV58 587 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 ASPRV1Q53RT3 343 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 FBXO11Q86XK2 927 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 GDPD5Q8WTR4 605 aa14.4□□□□□ -0.1
SAMM50-205ENST00000493621 DDX41Q9UJV9 622 aaKnown RBP14.4□□□□□ -0.1
SAMM50-205ENST00000493621 MRPL11Q9Y3B7 192 aaKnown RBP14.4□□□□□ -0.1
SAMM50-205ENST00000493621 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
SAMM50-205ENST00000493621 CFBP00751 764 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 CXCL10P02778 98 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 PLA2G5P39877 138 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 RBL2Q08999 1139 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 MFSD10Q14728 455 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 ZSCAN10Q96SZ4 725 aaPredicted RBP14.39□□□□□ -0.11
SAMM50-205ENST00000493621 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 EPHX3Q9H6B9 360 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 JMJD4Q9H9V9 463 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 PXMP2Q9NR77 195 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 BRWD1Q9NSI6 2320 aa14.39□□□□□ -0.11
SAMM50-205ENST00000493621 MICAL3Q7RTP6 2002 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 ABHD14A-ACY1A0A1B0GW23 586 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 SORBS3O60504 671 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
SAMM50-205ENST00000493621 GJB5O95377 273 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 NR3C2P08235 984 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 PARP1P09874 1014 aaKnown RBP14.38□□□□□ -0.11
SAMM50-205ENST00000493621 PTK7Q13308 1070 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 LAMC2Q13753 1193 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 KIAA0753Q2KHM9 967 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 FAM117BQ6P1L5 589 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 CWC27Q6UX04 472 aaKnown RBP14.38□□□□□ -0.11
SAMM50-205ENST00000493621 DHX37Q8IY37 1157 aaKnown RBP14.38□□□□□ -0.11
SAMM50-205ENST00000493621 ENAHQ8N8S7 591 aaPredicted RBP14.38□□□□□ -0.11
SAMM50-205ENST00000493621 PPTC7Q8NI37 304 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
SAMM50-205ENST00000493621 FAM122AQ96E09 287 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 RAD9AQ99638 391 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 ZSWIM5Q9P217 1185 aa14.38□□□□□ -0.11
SAMM50-205ENST00000493621 HAS3O00219 553 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 F2P00734 622 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 MYCLP12524 364 aaPredicted RBP14.37□□□□□ -0.11
SAMM50-205ENST00000493621 NT5C2P49902 561 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 ZNF200P98182 395 aaPredicted RBP14.37□□□□□ -0.11
SAMM50-205ENST00000493621 IKBKEQ14164 716 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 TRIM71Q2Q1W2 868 aaKnown RBP14.37□□□□□ -0.11
SAMM50-205ENST00000493621 ZNF618Q5T7W0 954 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 WNT8BQ93098 351 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
SAMM50-205ENST00000493621 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
SAMM50-205ENST00000493621 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms