RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 TRAF1Q13077 416 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 SEPT14Q6ZU15 432 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 VSIG10LQ86VR7 867 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 SESTD1Q86VW0 696 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 SLC17A8Q8NDX2 589 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 AFG1LQ8WV93 481 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 KAT2BQ92831 832 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 CTAGE1Q96RT6 745 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 SPZ1Q9BXG8 430 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 GPHNQ9NQX3 736 aaPredicted RBP16.32■□□□□ 0.2
ATG3-206ENST00000492886 SLC27A2O14975 620 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 DDAH1O94760 285 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 PGM5Q15124 567 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 CENPQQ7L2Z9 268 aaPredicted RBP16.31■□□□□ 0.2
ATG3-206ENST00000492886 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 IL31RAQ8NI17 732 aa16.31■□□□□ 0.2
ATG3-206ENST00000492886 CXXC1Q9P0U4 656 aaPredicted RBP16.31■□□□□ 0.2
ATG3-206ENST00000492886 SH2B2O14492 632 aaPredicted RBP16.3■□□□□ 0.2
ATG3-206ENST00000492886 CYP2C9P11712 490 aa16.3■□□□□ 0.2
ATG3-206ENST00000492886 CCL23P55773 120 aa16.3■□□□□ 0.2
ATG3-206ENST00000492886 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
ATG3-206ENST00000492886 PBX4Q9BYU1 374 aa16.3■□□□□ 0.2
ATG3-206ENST00000492886 EYSQ5T1H1 3165 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 MYO9BQ13459 2157 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 GRXCR1A8MXD5 290 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 GCOM1H8Y6P7 765 aaPredicted RBP16.29■□□□□ 0.2
ATG3-206ENST00000492886 HAS3O00219 553 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 PRC1O43663 620 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 FGBP02675 491 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 HOXA13P31271 388 aaPredicted RBP16.29■□□□□ 0.2
ATG3-206ENST00000492886 MCM5P33992 734 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 PBX2P40425 430 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 LIFRP42702 1097 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 PPTC7Q8NI37 304 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 SCLYQ96I15 445 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 UNC80Q8N2C7 3258 aa16.29■□□□□ 0.2
ATG3-206ENST00000492886 CUL9Q8IWT3 2517 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 F2P00734 622 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 PFKMP08237 780 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 SP2Q02086 613 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 RBL2Q08999 1139 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
ATG3-206ENST00000492886 TMTC2Q8N394 836 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 PPP1R13LQ8WUF5 828 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 MYLIPQ8WY64 445 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 MRVI1Q9Y6F6 885 aa16.28■□□□□ 0.2
ATG3-206ENST00000492886 TGFB3P10600 412 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.2
ATG3-206ENST00000492886 RFC2P35250 354 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.2
ATG3-206ENST00000492886 GRIN2CQ14957 1233 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 DGKDQ16760 1214 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 CELF3Q5SZQ8 465 aaKnown RBP16.27■□□□□ 0.2
ATG3-206ENST00000492886 GDF6Q6KF10 455 aaPredicted RBP16.27■□□□□ 0.2
ATG3-206ENST00000492886 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 SRBD1Q8N5C6 995 aaKnown RBP16.27■□□□□ 0.2
ATG3-206ENST00000492886 TIFAQ96CG3 184 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 ZNF576Q9H609 170 aa16.27■□□□□ 0.2
ATG3-206ENST00000492886 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 MEIS2O14770 477 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
ATG3-206ENST00000492886 UBA1P22314 1058 aaKnown RBP16.26■□□□□ 0.19
ATG3-206ENST00000492886 CCND2P30279 289 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 ICAM3P32942 547 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 KIF5BP33176 963 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 HSDL1Q3SXM5 330 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 OTOP2Q7RTS6 562 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
ATG3-206ENST00000492886 DHX38Q92620 1227 aaKnown RBP16.26■□□□□ 0.19
ATG3-206ENST00000492886 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
ATG3-206ENST00000492886 INPP4AQ96PE3 977 aaPredicted RBP16.26■□□□□ 0.19
ATG3-206ENST00000492886 MTIF3Q9H2K0 278 aaKnown RBP16.26■□□□□ 0.19
ATG3-206ENST00000492886 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
ATG3-206ENST00000492886 CHD7Q9P2D1 2997 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 PPFIA4O75335 1185 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 STAM2O75886 525 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 PSEN2P49810 448 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 GNAQP50148 359 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 SEMA3FQ13275 785 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 GPNMBQ14956 572 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 PTGISQ16647 500 aa16.25■□□□□ 0.19
ATG3-206ENST00000492886 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
ATG3-206ENST00000492886 MAFAQ8NHW3 353 aaPredicted RBP16.25■□□□□ 0.19
ATG3-206ENST00000492886 CAGE1Q8TC20 777 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms