RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 LIMS1P48059 325 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 MROH9Q5TGP6 573 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 RIOX2Q8IUF8 465 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 RCBTB1Q8NDN9 531 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 ZNF669Q96BR6 464 aaPredicted RBP7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 AARSD1Q9BTE6 412 aaKnown RBP7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 AP5M1Q9H0R1 490 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 BCAS3Q9H6U6 928 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 PPP1R1BQ9UD71 204 aaPredicted RBP7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 SIT1Q9Y3P8 196 aa7.23□□□□□ -1.25
SMARCC1-207ENST00000485833 LCP1P13796 627 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 ATF2P15336 505 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 BCL6P41182 706 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 CEP68Q76N32 757 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 ARMC5Q96C12 935 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 TMEM169Q96HH4 297 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 PWWP2AQ96N64 755 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 ARHGEF4Q9NR80 690 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 FBXL7Q9UJT9 491 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 FAN1Q9Y2M0 1017 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 NPFFR2Q9Y5X5 522 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 X6R8D5 127 aa7.22□□□□□ -1.25
SMARCC1-207ENST00000485833 SMARCA4P51532 1647 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 DLX3O60479 287 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 FGFR1P11362 822 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 MC3RP41968 323 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 SLC6A11P48066 632 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 FOXO4P98177 505 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 LRRC47Q8N1G4 583 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 NLGN1Q8N2Q7 840 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 SEC14L1Q92503 715 aa7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 TRMT2BQ96GJ1 504 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 HIRIP3Q9BW71 556 aaPredicted RBP7.21□□□□□ -1.26
SMARCC1-207ENST00000485833 LAMC3Q9Y6N6 1575 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 H7BY64 318 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 PDPK1O15530 556 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 SGSM2O43147 1006 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 CAP1Q01518 475 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 LSAMPQ13449 338 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 RASGRF1Q13972 1273 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 B3GNT8Q7Z7M8 397 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 CPA5Q8WXQ8 436 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 COA3Q9Y2R0 106 aaPredicted RBP7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 PCDHA2Q9Y5H9 948 aa7.2□□□□□ -1.26
SMARCC1-207ENST00000485833 WDR62O43379 1518 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 TRAV20A0A0B4J274 112 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 PRODHO43272 600 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 USP53Q70EK8 1073 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 CCDC113Q9H0I3 377 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 GPR27Q9NS67 375 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 SIRPGQ9P1W8 387 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 PMF1-BGLAPU3KQ54 211 aa7.19□□□□□ -1.26
SMARCC1-207ENST00000485833 TRIM13O60858 407 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 PABPC1P11940 636 aaKnown RBP7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 HTRA3P83110 453 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 MTERF2Q49AM1 385 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 RSPO2Q6UXX9 243 aaPredicted RBP7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 SPATC1Q76KD6 591 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 LINC01356Q8N9X3 169 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 OSBP2Q969R2 916 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 SPATA9Q9BWV2 254 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 CLDND1Q9NY35 253 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 PALD1Q9ULE6 856 aa7.18□□□□□ -1.26
SMARCC1-207ENST00000485833 CCDC85CA6NKD9 419 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 INHBBP09529 407 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 BMP7P18075 431 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 SERINC3Q13530 473 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 SF3A1Q15459 793 aaKnown RBP7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 CHRNA2Q15822 529 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 VMACQ2NL98 169 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 NSMFQ6X4W1 530 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 TTLL10Q6ZVT0 673 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 MIB1Q86YT6 1006 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 SMARCC2Q8TAQ2 1214 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 FNIP1Q8TF40 1166 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 KCNC2Q96PR1 638 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 PHF20Q9BVI0 1012 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 RAPGEFL1Q9UHV5 662 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 ZNF652Q9Y2D9 606 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 MRC2Q9UBG0 1479 aa7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 BAZ1BQ9UIG0 1483 aaKnown RBP7.17□□□□□ -1.26
SMARCC1-207ENST00000485833 RBL2Q08999 1139 aa7.16□□□□□ -1.26
SMARCC1-207ENST00000485833 VWA3BQ502W6 1294 aa7.16□□□□□ -1.26
SMARCC1-207ENST00000485833 YOD1Q5VVQ6 348 aaPredicted RBP7.16□□□□□ -1.26
SMARCC1-207ENST00000485833 MARCH10Q8NA82 808 aaPredicted RBP7.16□□□□□ -1.26
SMARCC1-207ENST00000485833 DCAF4Q8WV16 495 aa7.16□□□□□ -1.26
SMARCC1-207ENST00000485833 EPB41L1Q9H4G0 881 aa7.16□□□□□ -1.26
SMARCC1-207ENST00000485833 FFAR3O14843 346 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 MSCO60682 206 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 DGKIO75912 1065 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 C8BP07358 591 aa7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 SSRP1Q08945 709 aaKnown RBP7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 IFRD2Q12894 506 aaPredicted RBP7.15□□□□□ -1.26
SMARCC1-207ENST00000485833 NTRK3Q16288 839 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms