RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 CXCL17Q6UXB2 119 aa17.34■□□□□ 0.37
HLA-F-226ENST00000484704 SRBD1Q8N5C6 995 aaKnown RBP17.34■□□□□ 0.37
HLA-F-226ENST00000484704 RNPC3Q96LT9 517 aaKnown RBP17.34■□□□□ 0.37
HLA-F-226ENST00000484704 PRUNE2Q8WUY3 3088 aa17.33■□□□□ 0.37
HLA-F-226ENST00000484704 RBM47A0AV96 593 aaKnown RBP17.33■□□□□ 0.36
HLA-F-226ENST00000484704 KIAA0355O15063 1070 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 TLR3O15455 904 aaKnown RBP17.33■□□□□ 0.36
HLA-F-226ENST00000484704 MYL3P08590 195 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 CPA1P15085 419 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 FOSL2P15408 326 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 RAG1P15918 1043 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 CASTP20810 708 aaKnown RBP17.33■□□□□ 0.36
HLA-F-226ENST00000484704 CCSAPQ6IQ19 270 aaPredicted RBP17.33■□□□□ 0.36
HLA-F-226ENST00000484704 Q6ZUG5 572 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 TMTC3Q6ZXV5 915 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 TMEM39AQ9NV64 488 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 POLR3EQ9NVU0 708 aa17.33■□□□□ 0.36
HLA-F-226ENST00000484704 OPLAHO14841 1288 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
HLA-F-226ENST00000484704 PTGS1P23219 599 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 CCND2P30279 289 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 GRIN2CQ14957 1233 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 TMEM63BQ5T3F8 832 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 MRVI1Q9Y6F6 885 aa17.32■□□□□ 0.36
HLA-F-226ENST00000484704 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 ARVCFO00192 962 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
HLA-F-226ENST00000484704 GH1P01241 217 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 METAP2P50579 478 aaKnown RBP eCLIP17.31■□□□□ 0.36
HLA-F-226ENST00000484704 NKX3-2P78367 333 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 HEATR3Q7Z4Q2 680 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 COPS5Q92905 334 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 KCNB2Q92953 911 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 BRF1Q92994 677 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 PDCD2LQ9BRP1 358 aa17.31■□□□□ 0.36
HLA-F-226ENST00000484704 CCDC196A0A1B0GTZ2 297 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 CTAGE5O15320 804 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 CHMP4BP1P59074 171 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 GHRHRQ02643 423 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 FPGSQ05932 587 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 PGM5Q15124 567 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 LY6KQ17RY6 165 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 CDH23Q9H251 3354 aa17.3■□□□□ 0.36
HLA-F-226ENST00000484704 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
HLA-F-226ENST00000484704 PSMC6P62333 389 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 ITGA7Q13683 1181 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 ANKRD33Q7Z3H0 272 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
HLA-F-226ENST00000484704 TOX2Q96NM4 488 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 SEZ6LQ9BYH1 1024 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 PSTPIP2Q9H939 334 aa17.29■□□□□ 0.36
HLA-F-226ENST00000484704 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-226ENST00000484704 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-226ENST00000484704 KPNA6O60684 536 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 ARIH2O95376 493 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 DNAJB2P25686 324 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 RCAN1P53805 252 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 NAPAP54920 295 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 AKAP17AQ02040 695 aaKnown RBP17.28■□□□□ 0.36
HLA-F-226ENST00000484704 FAM47CQ5HY64 1035 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 C16orf59Q7L2K0 433 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
HLA-F-226ENST00000484704 MTG1Q9BT17 334 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-226ENST00000484704 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 CYP46A1Q9Y6A2 500 aa17.28■□□□□ 0.36
HLA-F-226ENST00000484704 V9GY48 417 aaPredicted RBP17.28■□□□□ 0.36
HLA-F-226ENST00000484704 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
HLA-F-226ENST00000484704 SPDYE3A6NKU9 549 aa17.27■□□□□ 0.36
HLA-F-226ENST00000484704 GRXCR1A8MXD5 290 aa17.27■□□□□ 0.36
HLA-F-226ENST00000484704 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
HLA-F-226ENST00000484704 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-226ENST00000484704 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.27■□□□□ 0.36
HLA-F-226ENST00000484704 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.35
HLA-F-226ENST00000484704 TMEM265A0A087WTH1 108 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 SORBS3O60504 671 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 TIMP1P01033 207 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 PBX2P40425 430 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 CDK7P50613 346 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 PURAQ00577 322 aaKnown RBP17.26■□□□□ 0.35
HLA-F-226ENST00000484704 LAMC2Q13753 1193 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 RUFY3Q7L099 469 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 IL31RAQ8NI17 732 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 ZNF576Q9H609 170 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
HLA-F-226ENST00000484704 DDX41Q9UJV9 622 aaKnown RBP17.26■□□□□ 0.35
HLA-F-226ENST00000484704 A6NJR5 290 aa17.25■□□□□ 0.35
HLA-F-226ENST00000484704 hCG_1984214I3L0E3 225 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms