RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 EMID1Q96A84 441 aaPredicted RBP22.64■■□□□ 1.21
R3HDM1-215ENST00000483021 SLC28A3Q9HAS3 691 aa22.64■■□□□ 1.21
R3HDM1-215ENST00000483021 PCDHA1Q9Y5I3 950 aa22.64■■□□□ 1.21
R3HDM1-215ENST00000483021 BAZ2BQ9UIF8 2168 aaKnown RBP22.64■■□□□ 1.21
R3HDM1-215ENST00000483021 TRIP12Q14669 1992 aaPredicted RBP22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 OPLAHO14841 1288 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 CASTP20810 708 aaKnown RBP22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 PTH1RQ03431 593 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 DGKDQ16760 1214 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 SESTD1Q86VW0 696 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 CCDC155Q8N6L0 562 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 NCOA7Q8NI08 942 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 VWCEQ96DN2 955 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 DDX41Q9UJV9 622 aaKnown RBP22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 MRVI1Q9Y6F6 885 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 TRANK1O15050 2925 aa22.63■■□□□ 1.21
R3HDM1-215ENST00000483021 SPTBN5Q9NRC6 3674 aaKnown RBP22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 SGSM2O43147 1006 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 PPP1R11O60927 126 aaPredicted RBP22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 WTAPQ15007 396 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 KCNV1Q6PIU1 500 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 CHST3Q7LGC8 479 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 DEFB128Q7Z7B8 93 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 CAGE1Q8TC20 777 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 KATNAL1Q9BW62 490 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 NKX2-4Q9H2Z4 354 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 PRDM12Q9H4Q4 367 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 RIOX1Q9H6W3 641 aa22.62■■□□□ 1.21
R3HDM1-215ENST00000483021 E7EWF7 191 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 IQCF3P0C7M6 154 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 ATP2A2P16615 1042 aaKnown RBP22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 CHMP4BP1P59074 171 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 LAMC2Q13753 1193 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 PTGISQ16647 500 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 STOX1Q6ZVD7 989 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 HOMER1Q86YM7 354 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 PDCD2LQ9BRP1 358 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 YBX2Q9Y2T7 364 aaKnown RBP22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 PCDHA11Q9Y5I1 949 aa22.61■■□□□ 1.21
R3HDM1-215ENST00000483021 PPTC7Q8NI37 304 aa22.6■■□□□ 1.21
R3HDM1-215ENST00000483021 PPP1R13LQ8WUF5 828 aa22.6■■□□□ 1.21
R3HDM1-215ENST00000483021 TTC28Q96AY4 2481 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 TROAPQ12815 778 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 PPP2R2DQ66LE6 453 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 CATIPQ7Z7H3 387 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 DHX37Q8IY37 1157 aaKnown RBP22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 TET1Q8NFU7 2136 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 AFAP1L1Q8TED9 768 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 KAT2BQ92831 832 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 PIGSQ96S52 555 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 SLC9A7Q96T83 725 aa22.59■■□□□ 1.21
R3HDM1-215ENST00000483021 PNMA6FA0A0J9YX94 578 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 GCOM1H8Y6P7 765 aaPredicted RBP22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 F2P00734 622 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 POLR2MP0CAP2 368 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 MYCLP12524 364 aaPredicted RBP22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 HOXA13P31271 388 aaPredicted RBP22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 RABGGTBP53611 331 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 PGM5Q15124 567 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 TMEM67Q5HYA8 995 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 GDF6Q6KF10 455 aaPredicted RBP22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 VSIG10LQ86VR7 867 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 USP38Q8NB14 1042 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 SYMPKQ92797 1274 aaKnown RBP22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 MAP4K1Q92918 833 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 GTF2IRD1Q9UHL9 959 aa22.58■■□□□ 1.21
R3HDM1-215ENST00000483021 BAIAP3O94812 1187 aa22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 PARNO95453 639 aaKnown RBP22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 TGFB3P10600 412 aa22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 CCND2P30279 289 aa22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 SLC35G1Q2M3R5 365 aa22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 C7orf31Q8N865 590 aa22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 PHOSPHO2Q8TCD6 241 aa22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 FTOQ9C0B1 505 aaKnown RBP eCLIP22.57■■□□□ 1.2
R3HDM1-215ENST00000483021 CYTH3O43739 400 aa22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 HOXD8P13378 290 aaPredicted RBP22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 PSEN2P49810 448 aa22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 RBL2Q08999 1139 aa22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 MB21D2Q8IYB1 491 aaPredicted RBP22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 MAP3K14Q99558 947 aa22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 SENP2Q9HC62 589 aa22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 TAF6LQ9Y6J9 622 aa22.56■■□□□ 1.2
R3HDM1-215ENST00000483021 PPFIA4O75335 1185 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 RGS20O76081 388 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 MFSD10Q14728 455 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 MYSM1Q5VVJ2 828 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 MTA3Q9BTC8 594 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 HDAC6Q9UBN7 1215 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 RBM8AQ9Y5S9 174 aaKnown RBP22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 PTPRSQ13332 1948 aa22.55■■□□□ 1.2
R3HDM1-215ENST00000483021 HAS3O00219 553 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 DDAH1O94760 285 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 GGPS1O95749 300 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 ZNF286BP0CG31 522 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 SELPP16109 830 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 IGFBP4P22692 258 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 KIF5BP33176 963 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 ANTXR2P58335 489 aa22.54■■□□□ 1.2
R3HDM1-215ENST00000483021 ADGRE1Q14246 886 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms