RNA–Protein interactions for RNA: ENST00000478509.1

FAM50A-204, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 3

Gene FAM50A, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-204ENST00000478509 Q7L0L9 218 aa17.48■□□□□ 0.39
FAM50A-204ENST00000478509 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
FAM50A-204ENST00000478509 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
FAM50A-204ENST00000478509 FANCBQ8NB91 859 aa17.48■□□□□ 0.39
FAM50A-204ENST00000478509 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
FAM50A-204ENST00000478509 LZTS2Q9BRK4 669 aa17.48■□□□□ 0.39
FAM50A-204ENST00000478509 MTG1Q9BT17 334 aaPredicted RBP17.48■□□□□ 0.39
FAM50A-204ENST00000478509 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
FAM50A-204ENST00000478509 UMODL1Q5DID0 1318 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 KLF18A0A0U1RQI7 1052 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 EIF3JO75822 258 aaKnown RBP17.47■□□□□ 0.39
FAM50A-204ENST00000478509 TIMP1P01033 207 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 GH1P01241 217 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 CD4P01730 458 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 MMP3P08254 477 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 CYP2C18P33260 490 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 FGD1P98174 961 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
FAM50A-204ENST00000478509 ARHGAP1Q07960 439 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 USP17L6PQ6QN14 398 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 SLC43A3Q8NBI5 491 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
FAM50A-204ENST00000478509 TRMT13Q9NUP7 481 aaKnown RBP17.47■□□□□ 0.39
FAM50A-204ENST00000478509 CNTNAP5Q8WYK1 1306 aa17.47■□□□□ 0.39
FAM50A-204ENST00000478509 GOLGA8AA7E2F4 631 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 GOLGA8BA8MQT2 603 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 ZBTB43O43298 467 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 RGS20O76081 388 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 CCND2P30279 289 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 HSPA4P34932 840 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 RTN1Q16799 776 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 TSGA10IPQ3SY00 556 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 HEATR3Q7Z4Q2 680 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
FAM50A-204ENST00000478509 ALDH8A1Q9H2A2 487 aaPredicted RBP17.46■□□□□ 0.39
FAM50A-204ENST00000478509 PPP4R2Q9NY27 417 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 MAP3K20Q9NYL2 800 aaKnown RBP17.46■□□□□ 0.39
FAM50A-204ENST00000478509 DDX41Q9UJV9 622 aaKnown RBP17.46■□□□□ 0.39
FAM50A-204ENST00000478509 SNX14Q9Y5W7 946 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 SCN5AQ14524 2016 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
FAM50A-204ENST00000478509 A6NJR5 290 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 REC8O95072 547 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 ACRP10323 421 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 CSF2RAP15509 400 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 CCL23P55773 120 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 UBE2SQ16763 222 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 NBPF20Q3BBV1 942 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 CUL5Q93034 780 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 HIPK3Q9H422 1215 aa17.45■□□□□ 0.38
FAM50A-204ENST00000478509 TRIP12Q14669 1992 aaPredicted RBP17.44■□□□□ 0.38
FAM50A-204ENST00000478509 ZNF286BP0CG31 522 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 CYP2C9P11712 490 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 SMARCA1P28370 1054 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 APOBRQ0VD83 1088 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 Q6ZUG5 572 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 SAMD3Q8N6K7 520 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
FAM50A-204ENST00000478509 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
FAM50A-204ENST00000478509 MEIS2O14770 477 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 GGPS1O95749 300 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 HMGB1P09429 215 aaKnown RBP17.43■□□□□ 0.38
FAM50A-204ENST00000478509 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
FAM50A-204ENST00000478509 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
FAM50A-204ENST00000478509 TMEM199Q8N511 208 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 DEFB123Q8N688 67 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 KCNB2Q92953 911 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 BRF1Q92994 677 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 FAM161BQ96MY7 647 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 FRMPD4Q14CM0 1322 aa17.43■□□□□ 0.38
FAM50A-204ENST00000478509 COL6A3P12111 3177 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 CASTP20810 708 aaKnown RBP17.42■□□□□ 0.38
FAM50A-204ENST00000478509 CDC27P30260 824 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 MRPS9P82933 396 aaKnown RBP17.42■□□□□ 0.38
FAM50A-204ENST00000478509 SP2Q02086 613 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 PPIGQ13427 754 aaKnown RBP eCLIP17.42■□□□□ 0.388e-12■□□□□ 8.2
FAM50A-204ENST00000478509 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 SCLYQ96I15 445 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.42■□□□□ 0.38
FAM50A-204ENST00000478509 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
FAM50A-204ENST00000478509 WNT8AQ9H1J5 351 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 PSTPIP2Q9H939 334 aa17.42■□□□□ 0.38
FAM50A-204ENST00000478509 KPNA6O60684 536 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 METAP2P50579 478 aaKnown RBP eCLIP17.41■□□□□ 0.38
FAM50A-204ENST00000478509 NAPAP54920 295 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 DGKDQ16760 1214 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 PPTC7Q8NI37 304 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 SPATA33Q96N06 139 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 ALG1Q9BT22 464 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 BCAS3Q9H6U6 928 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 NOD1Q9Y239 953 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 GBF1Q92538 1859 aa17.41■□□□□ 0.38
FAM50A-204ENST00000478509 PIK3CDO00329 1044 aa17.4■□□□□ 0.38
FAM50A-204ENST00000478509 PPFIA3O75145 1194 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms