RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 TTLL4Q14679 1199 aa25.72■■□□□ 1.71
SF1-214ENST00000477596 CXCL17Q6UXB2 119 aa25.72■■□□□ 1.71
SF1-214ENST00000477596 VSIG10LQ86VR7 867 aa25.72■■□□□ 1.71
SF1-214ENST00000477596 CCND2P30279 289 aa25.71■■□□□ 1.71
SF1-214ENST00000477596 PKN1Q16512 942 aa25.71■■□□□ 1.71
SF1-214ENST00000477596 PFKFB3Q16875 520 aaPredicted RBP25.71■■□□□ 1.71
SF1-214ENST00000477596 BARHL2Q9NY43 387 aa25.71■■□□□ 1.71
SF1-214ENST00000477596 SCG2P13521 617 aa25.7■■□□□ 1.7
SF1-214ENST00000477596 AK2P54819 239 aa25.7■■□□□ 1.7
SF1-214ENST00000477596 MRPS9P82933 396 aaKnown RBP25.7■■□□□ 1.7
SF1-214ENST00000477596 PPP1R18Q6NYC8 613 aa25.7■■□□□ 1.7
SF1-214ENST00000477596 ZNF274Q96GC6 653 aaPredicted RBP25.7■■□□□ 1.7
SF1-214ENST00000477596 GLT1D1Q96MS3 346 aa25.7■■□□□ 1.7
SF1-214ENST00000477596 SLC26A6Q9BXS9 759 aa25.7■■□□□ 1.7
SF1-214ENST00000477596 MRVI1Q9Y6F6 885 aa25.7■■□□□ 1.7
SF1-214ENST00000477596 NKRFO15226 690 aaKnown RBP eCLIP25.69■■□□□ 1.72e-8■■□□□ 12.1
SF1-214ENST00000477596 PRPF3O43395 683 aaKnown RBP25.69■■□□□ 1.7
SF1-214ENST00000477596 SORBS3O60504 671 aa25.69■■□□□ 1.7
SF1-214ENST00000477596 EIF5BO60841 1220 aaKnown RBP25.69■■□□□ 1.7
SF1-214ENST00000477596 IFNAR1P17181 557 aa25.69■■□□□ 1.7
SF1-214ENST00000477596 PGBD1Q96JS3 809 aa25.69■■□□□ 1.7
SF1-214ENST00000477596 DDX41Q9UJV9 622 aaKnown RBP25.69■■□□□ 1.7
SF1-214ENST00000477596 TPCN1Q9ULQ1 816 aa25.69■■□□□ 1.7
SF1-214ENST00000477596 hCG_1984214I3L0E3 225 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 ADAMTS3O15072 1205 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 PQBP1O60828 265 aaKnown RBP25.68■■□□□ 1.7
SF1-214ENST00000477596 DTNBO60941 627 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 ADCY7P51828 1080 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 TLE2Q04725 743 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 ARHGAP1Q07960 439 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 C1orf53Q5VUE5 145 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 CHRDL2Q6WN34 429 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 ZNF713Q8N859 430 aaPredicted RBP25.68■■□□□ 1.7
SF1-214ENST00000477596 VTI1AQ96AJ9 217 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 RIC8AQ9NPQ8 531 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 RTEL1Q9NZ71 1219 aa25.68■■□□□ 1.7
SF1-214ENST00000477596 PSMC6P62333 389 aa25.67■■□□□ 1.7
SF1-214ENST00000477596 RNF26Q9BY78 433 aaPredicted RBP25.67■■□□□ 1.7
SF1-214ENST00000477596 TMEM260Q9NX78 707 aa25.67■■□□□ 1.7
SF1-214ENST00000477596 PCDHA6Q9UN73 950 aa25.67■■□□□ 1.7
SF1-214ENST00000477596 PCDHA8Q9Y5H6 950 aa25.67■■□□□ 1.7
SF1-214ENST00000477596 ELP1O95163 1332 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 LTBP2Q14767 1821 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 SMCO2A6NFE2 343 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 LARGE1O95461 756 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 GH1P01241 217 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 MYL3P08590 195 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 CPT1AP50416 773 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 SCRN1Q12765 414 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 SEMA3FQ13275 785 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 SH3RF1Q7Z6J0 888 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 AFG1LQ8WV93 481 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 ALDH8A1Q9H2A2 487 aaPredicted RBP25.66■■□□□ 1.7
SF1-214ENST00000477596 PRDM5Q9NQX1 630 aaPredicted RBP25.66■■□□□ 1.7
SF1-214ENST00000477596 PDLIM7Q9NR12 457 aa25.66■■□□□ 1.7
SF1-214ENST00000477596 COLQQ9Y215 455 aaPredicted RBP25.66■■□□□ 1.7
SF1-214ENST00000477596 GRIN2DO15399 1336 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 A0A0U1RQG5 324 aaPredicted RBP25.65■■□□□ 1.7
SF1-214ENST00000477596 SPDYE3A6NKU9 549 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 ZEB2O60315 1214 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 UBA1P22314 1058 aaKnown RBP25.65■■□□□ 1.7
SF1-214ENST00000477596 NEK4P51957 841 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 SP2Q02086 613 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 PCNX4Q63HM2 1172 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 PPP1R13LQ8WUF5 828 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 INPP4AQ96PE3 977 aaPredicted RBP25.65■■□□□ 1.7
SF1-214ENST00000477596 MYH7BA7E2Y1 1941 aa25.65■■□□□ 1.7
SF1-214ENST00000477596 DOCK5Q9H7D0 1870 aa25.64■■□□□ 1.7
SF1-214ENST00000477596 A6NJR5 290 aa25.64■■□□□ 1.7
SF1-214ENST00000477596 CPLX1O14810 134 aa25.64■■□□□ 1.7
SF1-214ENST00000477596 PURAQ00577 322 aaKnown RBP25.64■■□□□ 1.7
SF1-214ENST00000477596 AKAP17AQ02040 695 aaKnown RBP25.64■■□□□ 1.7
SF1-214ENST00000477596 BCAS3Q9H6U6 928 aa25.64■■□□□ 1.7
SF1-214ENST00000477596 VPS54Q9P1Q0 977 aa25.64■■□□□ 1.7
SF1-214ENST00000477596 RBM27Q9P2N5 1060 aaKnown RBP25.64■■□□□ 1.7
SF1-214ENST00000477596 RANBP2P49792 3224 aaKnown RBP25.63■■□□□ 1.69
SF1-214ENST00000477596 MMP3P08254 477 aa25.63■■□□□ 1.69
SF1-214ENST00000477596 MAGEA10P43363 369 aaPredicted RBP25.63■■□□□ 1.69
SF1-214ENST00000477596 CDK7P50613 346 aa25.63■■□□□ 1.69
SF1-214ENST00000477596 ANO3Q9BYT9 981 aa25.63■■□□□ 1.69
SF1-214ENST00000477596 SLKQ9H2G2 1235 aaPredicted RBP25.63■■□□□ 1.69
SF1-214ENST00000477596 SCN10AQ9Y5Y9 1956 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 TRIM43BA6NCK2 446 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 ARVCFO00192 962 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 PFKFB2O60825 505 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 CABYRO75952 493 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 GGPS1O95749 300 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 CLK2P49760 499 aaKnown RBP25.62■■□□□ 1.69
SF1-214ENST00000477596 SSRP1Q08945 709 aaKnown RBP25.62■■□□□ 1.69
SF1-214ENST00000477596 ANKRD33Q7Z3H0 272 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 TRIM43Q96BQ3 446 aaPredicted RBP25.62■■□□□ 1.69
SF1-214ENST00000477596 AIFM3Q96NN9 605 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 KIF2CQ99661 725 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 POLR3EQ9NVU0 708 aa25.62■■□□□ 1.69
SF1-214ENST00000477596 ESYT2A0FGR8 921 aa25.61■■□□□ 1.69
SF1-214ENST00000477596 CLTBP09497 229 aa25.61■■□□□ 1.69
SF1-214ENST00000477596 MDM2Q00987 491 aaPredicted RBP25.61■■□□□ 1.69
SF1-214ENST00000477596 ITGA7Q13683 1181 aa25.61■■□□□ 1.69
SF1-214ENST00000477596 ANKRD1Q15327 319 aa25.61■■□□□ 1.69
SF1-214ENST00000477596 GNPTABQ3T906 1256 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms