RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 GHRHRQ02643 423 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 ITGA7Q13683 1181 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 PGM5Q15124 567 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 RTN1Q16799 776 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 CCDC62Q6P9F0 684 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 USP17L6PQ6QN14 398 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 ANKRD33Q7Z3H0 272 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.882e-6■■□□□ 12.7
HDAC6-221ENST00000477561 PDCD2LQ9BRP1 358 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 MAP3K20Q9NYL2 800 aaKnown RBP9.55□□□□□ -0.88
HDAC6-221ENST00000477561 GRIN2DO15399 1336 aa9.55□□□□□ -0.88
HDAC6-221ENST00000477561 SOX1O00570 391 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-221ENST00000477561 NKRFO15226 690 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDAC6-221ENST00000477561 CABYRO75952 493 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 RAG1P15918 1043 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 CASTP20810 708 aaKnown RBP9.54□□□□□ -0.88
HDAC6-221ENST00000477561 RPS6KB1P23443 525 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 CDC27P30260 824 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 ADD1P35611 737 aaKnown RBP9.54□□□□□ -0.88
HDAC6-221ENST00000477561 CPT1AP50416 773 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 HEATR3Q7Z4Q2 680 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 TDHQ8IZJ6 230 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 SMARCC2Q8TAQ2 1214 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 AFG1LQ8WV93 481 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 BRF1Q92994 677 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 LRCH3Q96II8 777 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 TOX2Q96NM4 488 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 TRPV6Q9H1D0 765 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 RBM28Q9NW13 759 aaKnown RBP9.54□□□□□ -0.88
HDAC6-221ENST00000477561 RTEL1Q9NZ71 1219 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 DDX41Q9UJV9 622 aaKnown RBP9.54□□□□□ -0.88
HDAC6-221ENST00000477561 MRVI1Q9Y6F6 885 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 TRIOBPQ9H2D6 2365 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 CNTNAP5Q8WYK1 1306 aa9.54□□□□□ -0.88
HDAC6-221ENST00000477561 A0A1W2PPC1 479 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 A6NJR5 290 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 MEIS2O14770 477 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 KIAA0355O15063 1070 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 PPFIA3O75145 1194 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 RGS20O76081 388 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 SLC34A2O95436 690 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 GH1P01241 217 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 PSMA5P28066 241 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 CCND2P30279 289 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 PURAQ00577 322 aaKnown RBP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 ARHGAP1Q07960 439 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 UBE2SQ16763 222 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 BRDTQ58F21 947 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 FAM47CQ5HY64 1035 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 FAM126BQ8IXS8 530 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 CUL5Q93034 780 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 MTG1Q9BT17 334 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 TBX21Q9UL17 535 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 V9GY48 417 aaPredicted RBP9.53□□□□□ -0.88
HDAC6-221ENST00000477561 MROH7Q68CQ1 1323 aa9.53□□□□□ -0.88
HDAC6-221ENST00000477561 TLR3O15455 904 aaKnown RBP9.52□□□□□ -0.89
HDAC6-221ENST00000477561 B4GALT4O60513 344 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 SEC24BO95487 1268 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 TIMP1P01033 207 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 CD4P01730 458 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 EPHB4P54760 987 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 MRPS9P82933 396 aaKnown RBP9.52□□□□□ -0.89
HDAC6-221ENST00000477561 SP2Q02086 613 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 FUT2Q10981 343 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 SHHQ15465 462 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 NBPF20Q3BBV1 942 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 C9orf50Q5SZB4 431 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 WWC2Q6AWC2 1192 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 DHX37Q8IY37 1157 aaKnown RBP9.52□□□□□ -0.89
HDAC6-221ENST00000477561 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 BCAS3Q9H6U6 928 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 SZT2Q5T011 3432 aa9.52□□□□□ -0.89
HDAC6-221ENST00000477561 PIK3CDO00329 1044 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 EPB41L2O43491 1005 aaKnown RBP9.51□□□□□ -0.89
HDAC6-221ENST00000477561 GGPS1O95749 300 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 MMP3P08254 477 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 CYP2C18P33260 490 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 NAPAP54920 295 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 CCT2P78371 535 aaKnown RBP9.51□□□□□ -0.89
HDAC6-221ENST00000477561 LAMC2Q13753 1193 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 RUFY3Q7L099 469 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 TBC1D32Q96NH3 1257 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
HDAC6-221ENST00000477561 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-221ENST00000477561 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
HDAC6-221ENST00000477561 TRMT13Q9NUP7 481 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms