RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 GRK7Q8WTQ7 553 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 TBC1D32Q96NH3 1257 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ATP6V0A4Q9HBG4 840 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 ADCY9O60503 1353 aa5.08□□□□□ -1.6
CCNL1-215ENST00000474539 STK36Q9NRP7 1315 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CFAP65Q6ZU64 1925 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GOLGA8QA0A0J9YX86 632 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GOLGA8OA6NCC3 632 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GOLGA8NF8WBI6 632 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GMNNO75496 209 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GCNT3O95395 438 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 UQCRHP07919 91 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 MUTP22033 750 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 SLC26A2P50443 739 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 MFAP3P55082 362 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GUCY1B3Q02153 619 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ILF2Q12905 390 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CALCOCO2Q13137 446 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PAK1Q13153 545 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 LAMC2Q13753 1193 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 POLA2Q14181 598 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ARHGAP15Q53QZ3 475 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 DCUN1D2Q6PH85 259 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 FERMT3Q86UX7 667 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 SCYL3Q8IZE3 742 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 FAM43AQ8N2R8 423 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 LEO1Q8WVC0 666 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 NLRP7Q8WX94 980 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 UBXN4Q92575 508 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GTF3C6Q969F1 213 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PLEKHF1Q96S99 279 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 SMARCAD1Q9H4L7 1026 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PIDD1Q9HB75 910 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 KCND2Q9NZV8 630 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 E7EVH7 732 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PFKFB2O60825 505 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CDK8P49336 464 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF165P49910 485 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 KPNA2P52292 529 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 OAZ1P54368 228 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PTGDRQ13258 359 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PTPN14Q15678 1187 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 RINT1Q6NUQ1 792 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PPP1R21Q6ZMI0 780 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 TRIM50Q86XT4 487 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 TPH2Q8IWU9 490 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 TBC1D16Q8TBP0 767 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 SCFD2Q8WU76 684 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 MMRN2Q9H8L6 949 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 RPF1Q9H9Y2 349 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 RNF146Q9NTX7 359 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 UTP6Q9NYH9 597 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 SEPT9Q9UHD8 586 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PRR12Q9ULL5 1215 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 STRIP2Q9ULQ0 834 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 JRKLQ9Y4A0 524 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 H7C4K7 107 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 K7ENM7 598 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ZBTB5O15062 677 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ACTN4O43707 911 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 DPEP1P16444 411 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 UBASH3AP57075 661 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 MYL5Q02045 173 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 RNF219Q5W0B1 726 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 TMCO3Q6UWJ1 677 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 G2E3Q7L622 706 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CHST3Q7LGC8 479 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CATSPER4Q7RTX7 472 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ELOA2Q8IYF1 753 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 MARCH10Q8NA82 808 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 MYOZ2Q9NPC6 264 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 KMT5AQ9NQR1 393 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GINS2Q9Y248 185 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PRAMEF22A3QJZ6 481 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 VWA3AA6NCI4 1184 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 ZBBXA8MT70 800 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 TFRCP02786 760 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 KRT19P08727 400 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 XRCC5P13010 732 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CD19P15391 556 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 NR1H3Q13133 447 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 KRT40Q6A162 431 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CYP26C1Q6V0L0 522 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GBP6Q6ZN66 633 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 GSTA5Q7RTV2 222 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 RAB11FIP4Q86YS3 637 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CD302Q8IX05 232 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 SMAP1Q8IYB5 467 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 CCDC110Q8TBZ0 833 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 RNF139Q8WU17 664 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 PSPC1Q8WXF1 523 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 HVCN1Q96D96 273 aa5.07□□□□□ -1.6
CCNL1-215ENST00000474539 NOC4LQ9BVI4 516 aaKnown RBP5.07□□□□□ -1.6
CCNL1-215ENST00000474539 UQCRHLA0A096LP55 91 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 LRRIQ4A6NIV6 560 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 TBX3O15119 743 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 RNF8O76064 485 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 CAMTA2O94983 1202 aa5.06□□□□□ -1.6
CCNL1-215ENST00000474539 HSPA4P34932 840 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms