RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 BLIDQ8IZY5 108 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 CCDC148Q8NFR7 591 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 MRPS27Q92552 414 aaKnown RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 COA7Q96BR5 231 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 C12orf42Q96LP6 360 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 RNPC3Q96LT9 517 aaKnown RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 SENP6Q9GZR1 1112 aaPredicted RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 NUP62CLQ9H1M0 184 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 GOLPH3LQ9H4A5 285 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 JMJD4Q9H9V9 463 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 PRDM5Q9NQX1 630 aaPredicted RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 CXXC1Q9P0U4 656 aaPredicted RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 FEM1BQ9UK73 627 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 NOL7Q9UMY1 257 aaKnown RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 PCDHA4Q9UN74 947 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 LOC285556D6RIA3 1793 aa9.52□□□□□ -0.89
FDPS-209ENST00000471117 ZFHX2Q9C0A1 2572 aaPredicted RBP9.52□□□□□ -0.89
FDPS-209ENST00000471117 TPRP12270 2363 aaKnown RBP9.51□□□□□ -0.89
FDPS-209ENST00000471117 PRRC2BQ5JSZ5 2229 aaKnown RBP9.51□□□□□ -0.89
FDPS-209ENST00000471117 ZNF318Q5VUA4 2279 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 PNMA6FA0A0J9YX94 578 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 hCG_1984214I3L0E3 225 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 CXCL11O14625 94 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 CUTAO60888 179 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 VCAM1P19320 739 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 CMA1P23946 247 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 HMGCS2P54868 508 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 NAPAP54920 295 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 TRAF1Q13077 416 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 MICALL1Q8N3F8 863 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 ZNF713Q8N859 430 aaPredicted RBP9.51□□□□□ -0.89
FDPS-209ENST00000471117 DAGLBQ8NCG7 672 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 ENGASEQ8NFI3 743 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 CCDC12Q8WUD4 166 aaPredicted RBP9.51□□□□□ -0.89
FDPS-209ENST00000471117 TIFAQ96CG3 184 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 TANGO6Q9C0B7 1094 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 TSPY26PQ9H489 355 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 RPAP3Q9H6T3 665 aaPredicted RBP9.51□□□□□ -0.89
FDPS-209ENST00000471117 GRPEL1Q9HAV7 217 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.51□□□□□ -0.89
FDPS-209ENST00000471117 PRR12Q9ULL5 1215 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 CEP131Q9UPN4 1083 aa9.51□□□□□ -0.89
FDPS-209ENST00000471117 BRWD1Q9NSI6 2320 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 COL11A1P12107 1806 aaPredicted RBP9.5□□□□□ -0.89
FDPS-209ENST00000471117 A0A1B0GVL5 298 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 SMCO2A6NFE2 343 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 M0R2N6 131 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 ZBTB5O15062 677 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 RTP1P59025 263 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 FAM160A1Q05DH4 1040 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 MOGSQ13724 837 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 CDC37Q16543 378 aaPredicted RBP9.5□□□□□ -0.89
FDPS-209ENST00000471117 CAMK4Q16566 473 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 QRICH1Q2TAL8 776 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 PIK3AP1Q6ZUJ8 805 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 FMR1NBQ8N0W7 255 aaPredicted RBP9.5□□□□□ -0.89
FDPS-209ENST00000471117 KRI1Q8N9T8 703 aaKnown RBP9.5□□□□□ -0.89
FDPS-209ENST00000471117 PRPF38AQ8NAV1 312 aaKnown RBP9.5□□□□□ -0.89
FDPS-209ENST00000471117 RASGRP4Q8TDF6 673 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 SLF1Q9BQI6 1058 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 TSPYL2Q9H2G4 693 aaPredicted RBP9.5□□□□□ -0.89
FDPS-209ENST00000471117 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 C6orf50Q9HD87 102 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 ATP11BQ9Y2G3 1177 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 RLFQ13129 1914 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 LRRC37A2A6NM11 1700 aa9.5□□□□□ -0.89
FDPS-209ENST00000471117 SMCHD1A6NHR9 2005 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 FRMPD3Q5JV73 1810 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 A0A0G2JLL6 359 aaPredicted RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 CCDC194A0A1B0GVG4 234 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 ESYT2A0FGR8 921 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 PI4K2BG5E9Z4 385 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 WNT7AO00755 349 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 KINO60870 393 aaKnown RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 FLOT1O75955 427 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 BMP15O95972 392 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 FDX1P10109 184 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 XRCC6P12956 609 aaKnown RBP eCLIP9.49□□□□□ -0.89
FDPS-209ENST00000471117 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
FDPS-209ENST00000471117 PTPREP23469 700 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 GNA11P29992 359 aa9.49□□□□□ -0.89
FDPS-209ENST00000471117 TRAPPC10P48553 1259 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms