RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 MAP3K14Q99558 947 aa22.31■■□□□ 1.16
CCHCR1-210ENST00000464012 SPZ1Q9BXG8 430 aa22.31■■□□□ 1.16
CCHCR1-210ENST00000464012 TRMT13Q9NUP7 481 aaKnown RBP22.31■■□□□ 1.16
CCHCR1-210ENST00000464012 MAP3K20Q9NYL2 800 aaKnown RBP22.31■■□□□ 1.16
CCHCR1-210ENST00000464012 SORBS3O60504 671 aa22.3■■□□□ 1.16
CCHCR1-210ENST00000464012 ARHGAP1Q07960 439 aa22.3■■□□□ 1.16
CCHCR1-210ENST00000464012 CMTR1Q8N1G2 835 aaKnown RBP22.3■■□□□ 1.16
CCHCR1-210ENST00000464012 TMTC2Q8N394 836 aa22.3■■□□□ 1.16
CCHCR1-210ENST00000464012 RRP36Q96EU6 259 aaKnown RBP22.3■■□□□ 1.16
CCHCR1-210ENST00000464012 NOC4LQ9BVI4 516 aaKnown RBP22.3■■□□□ 1.16
CCHCR1-210ENST00000464012 KPNA6O60684 536 aa22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 MMP3P08254 477 aa22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 CYP2C9P11712 490 aa22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 SMAD3P84022 425 aaKnown RBP22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 TMEM240Q5SV17 173 aa22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 SAMD3Q8N6K7 520 aa22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 SEC63Q9UGP8 760 aaKnown RBP22.29■■□□□ 1.16
CCHCR1-210ENST00000464012 CCND2P30279 289 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 LIFRP42702 1097 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 FAM109BQ6ICB4 259 aaPredicted RBP22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 ZNF365Q70YC5 407 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 C16orf59Q7L2K0 433 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 MICU3Q86XE3 530 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 SRBD1Q8N5C6 995 aaKnown RBP22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 TCEANC2Q96MN5 208 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 WNT8AQ9H1J5 351 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 DDX41Q9UJV9 622 aaKnown RBP22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 SLC12A7Q9Y666 1083 aa22.28■■□□□ 1.16
CCHCR1-210ENST00000464012 TRIP12Q14669 1992 aaPredicted RBP22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 RGS20O76081 388 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 CALM1P0DP23 149 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 CALM2P0DP24 149 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 CALM3P0DP25 149 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 GNAQP50148 359 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 PSRC1Q6PGN9 363 aaPredicted RBP22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 SCLYQ96I15 445 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 NEK1Q96PY6 1258 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 LZTS2Q9BRK4 669 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 IL23AQ9NPF7 189 aa22.27■■□□□ 1.16
CCHCR1-210ENST00000464012 LAMA2P24043 3122 aaKnown RBP22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 hCG_1642624A0A1W2PR95 340 aa22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 SUPT20HL2P0C7V6 817 aa22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 NFRKBQ6P4R8 1299 aa22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 DHX37Q8IY37 1157 aaKnown RBP22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 CCDC82Q8N4S0 544 aa22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 SMARCC2Q8TAQ2 1214 aa22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 GUCD1Q96NT3 240 aa22.26■■□□□ 1.15
CCHCR1-210ENST00000464012 ADCK5Q3MIX3 580 aa22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 VSIG10LQ86VR7 867 aa22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 RASEFQ8IZ41 740 aa22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 GPKOWQ92917 476 aaPredicted RBP eCLIP22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 CUL5Q93034 780 aa22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 NOD1Q9Y239 953 aa22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 STXBP5LQ9Y2K9 1186 aa22.25■■□□□ 1.15
CCHCR1-210ENST00000464012 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 GGPS1O95749 300 aa22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 ZNF286BP0CG31 522 aa22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 CASTP20810 708 aaKnown RBP22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 SMARCA1P28370 1054 aa22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 DGKDQ16760 1214 aa22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 USP17L6PQ6QN14 398 aa22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 SYNE3Q6ZMZ3 975 aa22.24■■□□□ 1.15
CCHCR1-210ENST00000464012 UBA1P22314 1058 aaKnown RBP22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 LAMC2Q13753 1193 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 APOA5Q6Q788 366 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 TMTC3Q6ZXV5 915 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 OTOP2Q7RTS6 562 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 SGMS1Q86VZ5 419 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 FANCBQ8NB91 859 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 PPTC7Q8NI37 304 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 KAT2BQ92831 832 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 EMID1Q96A84 441 aaPredicted RBP22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 ALG1Q9BT22 464 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 TTYH1Q9H313 450 aaPredicted RBP22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 FRMPD4Q14CM0 1322 aa22.23■■□□□ 1.15
CCHCR1-210ENST00000464012 GRXCR1A8MXD5 290 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 FGBP02675 491 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 NEFLP07196 543 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 DNAJB2P25686 324 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 PTPN11Q06124 597 aaPredicted RBP22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 KCNV1Q6PIU1 500 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 SPATA33Q96N06 139 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 SEMA6BQ9H3T3 888 aa22.22■■□□□ 1.15
CCHCR1-210ENST00000464012 PSEN2P49810 448 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 MRPS9P82933 396 aaKnown RBP22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 SP2Q02086 613 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 PTGISQ16647 500 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 HSDL1Q3SXM5 330 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 CELF3Q5SZQ8 465 aaKnown RBP22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 RASIP1Q5U651 963 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 MYSM1Q5VVJ2 828 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 GDF6Q6KF10 455 aaPredicted RBP22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 DHX32Q7L7V1 743 aaKnown RBP22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 DEFB128Q7Z7B8 93 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 HERVK_113Q902F9 699 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 MTIF3Q9H2K0 278 aaKnown RBP22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 RTEL1Q9NZ71 1219 aa22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 CXXC1Q9P0U4 656 aaPredicted RBP22.21■■□□□ 1.15
CCHCR1-210ENST00000464012 MEIS2O14770 477 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms