RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GOLGA8A	A7E2F4	631 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	GOLGA8B	A8MQT2	603 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	KPNA6	O60684	536 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	ARIH2	O95376	493 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	LIFR	P42702	1097 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	HSD17B4	P51659	736 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	TROAP	Q12815	778 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	TTLL4	Q14679	1199 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	SLC35G1	Q2M3R5	365 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	TSGA10IP	Q3SY00	556 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	CCDC82	Q8N4S0	544 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	NSUN6	Q8TEA1	469 aa	Known RBP	14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	HERVK_113	Q902F9	699 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	TBC1D5	Q92609	795 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	PIGS	Q96S52	555 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	AMN	Q9BXJ7	453 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	TRPV6	Q9H1D0	765 aa		14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	SEC63	Q9UGP8	760 aa	Known RBP	14.7	□□□□□ -0.06
FDPS-204	ENST00000461507	BAZ2B	Q9UIF8	2168 aa	Known RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	ZBTB43	O43298	467 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	PPP1R11	O60927	126 aa	Predicted RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	TXN	P10599	105 aa	Known RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	RPS6KB1	P23443	525 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	DNAJB2	P25686	324 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	GNAQ	P50148	359 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	PTPN11	Q06124	597 aa	Predicted RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	APOBR	Q0VD83	1088 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	BRDT	Q58F21	947 aa	Predicted RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	NFRKB	Q6P4R8	1299 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	ZNF365	Q70YC5	407 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	CMTR1	Q8N1G2	835 aa	Known RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	BRF1	Q92994	677 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	VWCE	Q96DN2	955 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	TAAR1	Q96RJ0	339 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	UPF3B	Q9BZI7	483 aa	Known RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	MAP3K20	Q9NYL2	800 aa	Known RBP	14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	CYP46A1	Q9Y6A2	500 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	SCN5A	Q14524	2016 aa		14.69	□□□□□ -0.06
FDPS-204	ENST00000461507	ZBTB5	O15062	677 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	EPB41L2	O43491	1005 aa	Known RBP	14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	PLEKHA8P1	O95397	391 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	MYL3	P08590	195 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	SUPT20HL2	P0C7V6	817 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	EXOSC10	Q01780	885 aa	Known RBP	14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	ARHGAP1	Q07960	439 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	RTN1	Q16799	776 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	APOA5	Q6Q788	366 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	SAMD3	Q8N6K7	520 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	COPS5	Q92905	334 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	KCNB2	Q92953	911 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	EMID1	Q96A84	441 aa	Predicted RBP	14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	RRP36	Q96EU6	259 aa	Known RBP	14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	RMDN3	Q96TC7	470 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	RIOX1	Q9H6W3	641 aa		14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	TRMT13	Q9NUP7	481 aa	Known RBP	14.68	□□□□□ -0.06
FDPS-204	ENST00000461507	ACR	P10323	421 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	METAP2	P50579	478 aa	Known RBP eCLIP	14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	STXBP2	Q15833	593 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	SGMS1	Q86VZ5	419 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	LZTS2	Q9BRK4	669 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	MTIF3	Q9H2K0	278 aa	Known RBP	14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	PXMP2	Q9NR77	195 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	RBM28	Q9NW13	759 aa	Known RBP	14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	BRPF3	Q9ULD4	1205 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	PCDHA1	Q9Y5I3	950 aa		14.67	□□□□□ -0.06
FDPS-204	ENST00000461507	MYH7B	A7E2Y1	1941 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	hCG_1642624	A0A1W2PR95	340 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	PITPNM1	O00562	1244 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	CYTH3	O43739	400 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	EIF3J	O75822	258 aa	Known RBP	14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	CFB	P00751	764 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	GH1	P01241	217 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	PFKM	P08237	780 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	MMP3	P08254	477 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	HOXD8	P13378	290 aa	Predicted RBP	14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	TRAF1	Q13077	416 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	NBPF20	Q3BBV1	942 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	RUFY3	Q7L099	469 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	SESTD1	Q86VW0	696 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	FANCB	Q8NB91	859 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	MYLIP	Q8WY64	445 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	TIFA	Q96CG3	184 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	MAP3K14	Q99558	947 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	PDCD2L	Q9BRP1	358 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	PBX4	Q9BYU1	374 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	PDRG1	Q9NUG6	133 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	CXXC1	Q9P0U4	656 aa	Predicted RBP	14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	FRMPD4	Q14CM0	1322 aa		14.66	□□□□□ -0.06
FDPS-204	ENST00000461507	PNMA6F	A0A0J9YX94	578 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	RGS20	O76081	388 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	FGB	P02675	491 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	NR3C2	P08235	984 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	EIF2AK2	P19525	551 aa	Known RBP	14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	CCL23	P55773	120 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	RAB30	Q15771	203 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	ARHGEF16	Q5VV41	709 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	TMTC3	Q6ZXV5	915 aa		14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	SRBD1	Q8N5C6	995 aa	Known RBP	14.65	□□□□□ -0.06
FDPS-204	ENST00000461507	MAFA	Q8NHW3	353 aa	Predicted RBP	14.65	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms