RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 A6NJR5 290 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 GH1P01241 217 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 CD4P01730 458 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 PTGS1P23219 599 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 ITGB8P26012 769 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 CCND2P30279 289 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 CCDC62Q6P9F0 684 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 FCHSD1Q86WN1 690 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 PDCD2LQ9BRP1 358 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
SCARNA2-201ENST00000458748 KLF18A0A0U1RQI7 1052 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 STAM2O75886 525 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 MYCLP12524 364 aaPredicted RBP20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 PURAQ00577 322 aaKnown RBP20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 FPGSQ05932 587 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 PGM5Q15124 567 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 GNPTABQ3T906 1256 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 VSIG10LQ86VR7 867 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 TEX2Q8IWB9 1127 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 TCEANC2Q96MN5 208 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 MTG1Q9BT17 334 aaPredicted RBP20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 MRVI1Q9Y6F6 885 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 GRIN2DO15399 1336 aa20.19■□□□□ 0.82
SCARNA2-201ENST00000458748 GOLGA8AA7E2F4 631 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 GOLGA8BA8MQT2 603 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 PIK3CDO00329 1044 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 ARIH2O95376 493 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 MYL3P08590 195 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 MFSD5Q6N075 450 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 Q6ZUG5 572 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 RAB11FIP4Q86YS3 637 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 PSTPIP2Q9H939 334 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 STXBP5LQ9Y2K9 1186 aa20.18■□□□□ 0.82
SCARNA2-201ENST00000458748 SCN10AQ9Y5Y9 1956 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 hCG_1984214I3L0E3 225 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 TGFB3P10600 412 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 CASTP20810 708 aaKnown RBP20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 LAMC2Q13753 1193 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 COL9A3Q14050 684 aaPredicted RBP20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 XRRA1Q6P2D8 792 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 FBXL16Q8N461 479 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 ZNF713Q8N859 430 aaPredicted RBP20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 COPS5Q92905 334 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 FAM161BQ96MY7 647 aa20.17■□□□□ 0.82
SCARNA2-201ENST00000458748 RPS6KB1P23443 525 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 PSMC6P62333 389 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 LY6KQ17RY6 165 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 HEATR3Q7Z4Q2 680 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 TMEM199Q8N511 208 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 EMID1Q96A84 441 aaPredicted RBP20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 GLT8D2Q9H1C3 349 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 EHMT1Q9H9B1 1298 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 DDX41Q9UJV9 622 aaKnown RBP20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 BRPF3Q9ULD4 1205 aa20.16■□□□□ 0.82
SCARNA2-201ENST00000458748 SPDYE3A6NKU9 549 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 SUPT20HL2P0C7V6 817 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 EPHB4P54760 987 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 ARHGAP1Q07960 439 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 PPIGQ13427 754 aaKnown RBP eCLIP20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 FAM109BQ6ICB4 259 aaPredicted RBP20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 PPP1R18Q6NYC8 613 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 DHX37Q8IY37 1157 aaKnown RBP20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 BRF1Q92994 677 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 MYH7BA7E2Y1 1941 aa20.15■□□□□ 0.82
SCARNA2-201ENST00000458748 FRMPD4Q14CM0 1322 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 PTPN11Q06124 597 aaPredicted RBP20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 DGKDQ16760 1214 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 GUCD1Q96NT3 240 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 USP26Q9BXU7 913 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 HIPK3Q9H422 1215 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 CYP46A1Q9Y6A2 500 aa20.14■□□□□ 0.81
SCARNA2-201ENST00000458748 CNTNAP5Q8WYK1 1306 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 B4GALT4O60513 344 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 MMP3P08254 477 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 NAPAP54920 295 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 APOBRQ0VD83 1088 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 ZNF697Q5TEC3 545 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 PCNX4Q63HM2 1172 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 USP17L6PQ6QN14 398 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 RUFY3Q7L099 469 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 KATNAL1Q9BW62 490 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 TM6SF1Q9BZW5 370 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 TRPV6Q9H1D0 765 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 COL6A3P12111 3177 aa20.13■□□□□ 0.81
SCARNA2-201ENST00000458748 MEIS2O14770 477 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 CPA1P15085 419 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 AKAP17AQ02040 695 aaKnown RBP20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 NBPF20Q3BBV1 942 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 NLRX1Q86UT6 975 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 PPTC7Q8NI37 304 aa20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 CCDC12Q8WUD4 166 aaPredicted RBP20.12■□□□□ 0.81
SCARNA2-201ENST00000458748 RNPC3Q96LT9 517 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms