RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 WWC2Q6AWC2 1192 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 RPAINQ86UA6 219 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 CCDC84Q86UT8 332 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 MCATQ8IVS2 390 aaKnown RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 XAGE3Q8WTP9 111 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 CYB5D2Q8WUJ1 264 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 JPH3Q8WXH2 748 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 CHMP4CQ96CF2 233 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 SHDQ96IW2 340 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 PAWRQ96IZ0 340 aaKnown RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 CDHR1Q96JP9 859 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 DPH2Q9BQC3 489 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 NT5C1AQ9BXI3 368 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 RIC8AQ9NPQ8 531 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 PLCB1Q9NQ66 1216 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 AASDHPPTQ9NRN7 309 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZNF180Q9UJW8 692 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 SYNRGQ9UMZ2 1314 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 VSTM5A8MXK1 200 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 C9IYK1 514 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 SNX2O60749 519 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 VAMP4O75379 141 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 RHOBTB3O94955 611 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 ESR1P03372 595 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 RAC2P15153 192 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 PHKG2P15735 406 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 TNFAIP3P21580 790 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 EIF4A3P38919 411 aaKnown RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 TSPAN7P41732 249 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 RAP1GAPP47736 663 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 NUCB1Q02818 461 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 WASHC5Q12768 1159 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 MTMR1Q13613 665 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 PDE1CQ14123 709 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 GAB4Q2WGN9 574 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 NBPF9Q3BBW0 867 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 MTERF2Q49AM1 385 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 SPECC1Q5M775 1068 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 JAKMIP3Q5VZ66 844 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 CXorf57Q6NSI4 855 aaKnown RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 MPZL3Q6UWV2 235 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 PRR23BQ6ZRT6 265 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 NECAB2Q7Z6G3 386 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 CDH24Q86UP0 819 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 SKAP1Q86WV1 359 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 LMNTD2Q8IXW0 634 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 LSM14AQ8ND56 463 aaKnown RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 PHC3Q8NDX5 983 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZNF296Q8WUU4 475 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 UBE2FQ969M7 185 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 ACSF2Q96CM8 615 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 Q96M66 194 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 TOX2Q96NM4 488 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 KMT5AQ9NQR1 393 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 SLAMF8Q9P0V8 285 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 TMEM59LQ9UK28 342 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 MAPRE3Q9UPY8 281 aa4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 MORC2Q9Y6X9 1032 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P30-201ENST00000457863 GSG1L2A8MUP6 293 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 IRS4O14654 1257 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 NBNO60934 754 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 RFPL3O75679 317 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 ABLIM3O94929 683 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 HPXP02790 462 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 KRT1P04264 644 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 SRFP11831 508 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 NCAM1P13591 858 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZSCAN20P17040 1043 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 FLT3P36888 993 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 TDO2P48775 406 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 RENBPP51606 427 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 GTF2A2P52657 109 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZBED6P86452 979 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 CHAF1AQ13111 956 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 BIRC3Q13489 604 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 SEPT2Q15019 361 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 MAP3K11Q16584 847 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 TMEM201Q5SNT2 666 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 MZT2BQ6NZ67 158 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 C1QL4Q86Z23 238 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 NDUFAF2Q8N183 169 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 FAM169BQ8N8A8 192 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 NKAIN3Q8N8D7 197 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 FBXO15Q8NCQ5 510 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 TIFAQ96CG3 184 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZNF496Q96IT1 587 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 YIPF4Q9BSR8 244 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 RHOBTB2Q9BYZ6 727 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 CCDC8Q9H0W5 538 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 TRIT1Q9H3H1 467 aaKnown RBP4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 CNNM2Q9H8M5 875 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 PRDM11Q9NQV5 511 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 SLC5A4Q9NY91 659 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZSWIM5Q9P217 1185 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 CEP131Q9UPN4 1083 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 DGKBQ9Y6T7 804 aa4.72□□□□□ -1.65
HMGB3P30-201ENST00000457863 DNAJC25-GNG10A0A024R161 153 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 A6NCN8 305 aa4.71□□□□□ -1.66
HMGB3P30-201ENST00000457863 MINDY4BA8MYZ0 360 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms