RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TMEM52Q8NDY8 209 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 USP33Q8TEY7 942 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 DPF3Q92784 378 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 SLC5A5Q92911 643 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 FBXW5Q969U6 566 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 COX4I2Q96KJ9 171 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 MPHOSPH6Q99547 160 aaKnown RBP5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 SMURF1Q9HCE7 757 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 CABP5Q9NP86 173 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 C14orf119Q9NWQ9 140 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 ZNF281Q9Y2X9 895 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 PCDHA2Q9Y5H9 948 aa5.5□□□□□ -1.53
HMGN3P1-201ENST00000453847 TCRBV5S4A2TA0A5A2 114 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 FGF10O15520 208 aaPredicted RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 PPP1R11O60927 126 aaPredicted RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 ULK1O75385 1050 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 GSTM1P09488 218 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 PF4V1P10720 104 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 GPR3P46089 330 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 HTRA3P83110 453 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 LRRC32Q14392 662 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 TERF2Q15554 542 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 KIZQ2M2Z5 673 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 TMEM240Q5SV17 173 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 EEF1DP3Q658K8 133 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 IQCEQ6IPM2 695 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 OGFOD3Q6PK18 319 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 CPNE8Q86YQ8 564 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 CMTR2Q8IYT2 770 aaKnown RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 CISD2Q8N5K1 135 aaKnown RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 LINC00116Q8NCU8 138 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 PIWIL2Q8TC59 973 aaKnown RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 IL17RAQ96F46 866 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 ALG1Q9BT22 464 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 TOPORSQ9NS56 1045 aaPredicted RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 GPATCH2Q9NW75 528 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 DDX20Q9UHI6 824 aaKnown RBP5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 USP21Q9UK80 565 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 ANKRD6Q9Y2G4 727 aa5.49□□□□□ -1.53
HMGN3P1-201ENST00000453847 LCHNA4D1U4 455 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 GOLGA6CA6NDK9 693 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 GOLGA6BA6NDN3 693 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 IGF2BP3O00425 579 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 H2AFYO75367 372 aaKnown RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 ZRANB2O95218 330 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 LTFP02788 710 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 GOLGA6DP0CG33 693 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 TRIM27P14373 513 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 COL8A1P27658 744 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 RXRBP28702 533 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 RECQLP46063 649 aaPredicted RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 JAM2P57087 298 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 SESN3P58005 492 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 SMAD3P84022 425 aaKnown RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 FAPQ12884 760 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 HDAC1Q13547 482 aaPredicted RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 ADGRE1Q14246 886 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 PDCD1Q15116 288 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 SMAD2Q15796 467 aaKnown RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 PRRT3Q5FWE3 981 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 PPP4R4Q6NUP7 873 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 PGM2L1Q6PCE3 622 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 ZPBP2Q6X784 338 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 NLRP10Q86W26 655 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 OSTM1Q86WC4 334 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 EFHBQ8N7U6 833 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 PTCHD1Q96NR3 888 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 ARPC5LQ9BPX5 153 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 YIPF2Q9BWQ6 316 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 JAM3Q9BX67 310 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 ASCC2Q9H1I8 757 aaPredicted RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 SLC12A5Q9H2X9 1139 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 AP5S1Q9NUS5 200 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 GOLGA6AQ9NYA3 693 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 MKL2Q9ULH7 1088 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 PNMA8BQ9ULN7 279 aaPredicted RBP5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 COMMD10Q9Y6G5 202 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 CNTNAP5Q8WYK1 1306 aa5.48□□□□□ -1.53
HMGN3P1-201ENST00000453847 NPHP3-ACAD11A0A0J9YXS1 232 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 TMEM82A0PJX8 343 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 C7orf72A4D263 438 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 TRIM75PA6NK02 468 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 PLIN1O60240 522 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 SNUPNO95149 360 aaKnown RBP5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 SYPP08247 313 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 PDE6AP16499 860 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 PAMP19021 973 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 GRK2P25098 689 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 GRK3P35626 688 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 BCL6P41182 706 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 KRT85P78386 507 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 MBTPS1Q14703 1052 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 GRM3Q14832 879 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 DDB1Q16531 1140 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 NKPD1Q17RQ9 610 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 CLEC16AQ2KHT3 1053 aa5.47□□□□□ -1.53
HMGN3P1-201ENST00000453847 GAB4Q2WGN9 574 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms