RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 TM4SF4P48230 202 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 SARSP49591 514 aaKnown RBP6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 AK2P54819 239 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 PAK1Q13153 545 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 DDB1Q16531 1140 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 BROXQ5VW32 411 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 OTOP1Q7RTM1 612 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 CCDC103Q8IW40 242 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 VWA5B2Q8N398 1253 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 TEX19Q8NA77 164 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 VPS37AQ8NEZ2 397 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 PARD3BQ8TEW8 1205 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 TEKT5Q96M29 485 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 SUGCTQ9HAC7 445 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 TMEFF2Q9UIK5 374 aaPredicted RBP6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 GGA1Q9UJY5 639 aa6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 SF3B6Q9Y3B4 125 aaKnown RBP6.59□□□□□ -1.35
TM9SF3-202ENST00000443638 ERBB4Q15303 1308 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 KLHL33A6NCF5 533 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 H2AFYO75367 372 aaKnown RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 DEAF1O75398 565 aaPredicted RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 ZBED1O96006 694 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 ALAS2P22557 587 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 PHC1P78364 1004 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 ADCY1Q08828 1119 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 CHAF1AQ13111 956 aaPredicted RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 STK3Q13188 491 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 SIM2Q14190 667 aaPredicted RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 TERF2Q15554 542 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 ALFQ53S48 1182 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 IFIT1BQ5T764 474 aaKnown RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 SRGAP1Q7Z6B7 1085 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 CATIPQ7Z7H3 387 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 CMIPQ8IY22 773 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 FAM186BQ8IYM0 893 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 NKAPQ8N5F7 415 aaKnown RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 UBASH3BQ8TF42 649 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 LMBR1Q8WVP7 490 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 ORAI2Q96SN7 254 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 TOPORSQ9NS56 1045 aaPredicted RBP6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 GFOD1Q9NXC2 390 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 RNF112Q9ULX5 631 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 DMTF1Q9Y222 760 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 SCINQ9Y6U3 715 aa6.58□□□□□ -1.36
TM9SF3-202ENST00000443638 CFAP69A5D8W1 941 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 H0Y8X5 98 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 TPP1O14773 563 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 AP1G1O43747 822 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 NBNO60934 754 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 LILRB5O75023 590 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 PPFIA3O75145 1194 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 SETSIPP0DME0 302 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 LTBRP36941 435 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 MAP2K3P46734 347 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 ATAT1Q5SQI0 421 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 C1orf228Q6PIY5 440 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 KRBA2Q6ZNG9 492 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 SLCO4C1Q6ZQN7 724 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 SV2AQ7L0J3 742 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 SRLQ86TD4 932 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 RASSF3Q86WH2 238 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 SMG8Q8ND04 991 aaKnown RBP6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 MYD88Q99836 296 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 RSAD1Q9HA92 442 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 FNIP2Q9P278 1114 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 GTF2A1LQ9UNN4 478 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
TM9SF3-202ENST00000443638 CCDC66A2RUB6 948 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 CDC14CA4D256 554 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 AURKAO14965 403 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 XPOTO43592 962 aaKnown RBP6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 SIGLEC6O43699 453 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 CTNND1O60716 968 aaKnown RBP6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 TIAF1O95411 115 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 VSIG8P0DPA2 414 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 ZNF267Q14586 743 aaPredicted RBP6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 ARHGAP44Q17R89 818 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 DPY19L1Q2PZI1 675 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 WDR78Q5VTH9 848 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 E4F1Q66K89 784 aaPredicted RBP6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 CCDC70Q6NSX1 233 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 LETMD1Q6P1Q0 360 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 PAF1Q8N7H5 531 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 FAM193BQ96PV7 902 aaPredicted RBP6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 ALG1Q9BT22 464 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 RNF38Q9H0F5 515 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 GPRC5CQ9NQ84 441 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 PGAP2Q9UHJ9 254 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 INVSQ9Y283 1065 aa6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 MORC2Q9Y6X9 1032 aaPredicted RBP6.56□□□□□ -1.36
TM9SF3-202ENST00000443638 LOC100996750A0A140TA64 210 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 MEFVO15553 781 aaPredicted RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 OFD1O75665 1012 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 SLITRK5O94991 958 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 EPXP11678 715 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 LCP1P13796 627 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 ZKSCAN1P17029 563 aaPredicted RBP6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 ETV3P41162 512 aa6.55□□□□□ -1.36
TM9SF3-202ENST00000443638 SCAND1P57086 179 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms