RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LAMC2Q13753 1193 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 PTGISQ16647 500 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 DGKDQ16760 1214 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 CHST3Q7LGC8 479 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 SESTD1Q86VW0 696 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 CCDC155Q8N6L0 562 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 PPP1R13LQ8WUF5 828 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 EMID1Q96A84 441 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-219ENST00000440240 MAD2L2Q9UI95 211 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 SUPT16HQ9Y5B9 1047 aaKnown RBP24.12■■□□□ 1.45
CPNE1-219ENST00000440240 PCDHA1Q9Y5I3 950 aa24.12■■□□□ 1.45
CPNE1-219ENST00000440240 ERICH2A1L162 156 aa24.11■■□□□ 1.45
CPNE1-219ENST00000440240 IGFBP4P22692 258 aa24.11■■□□□ 1.45
CPNE1-219ENST00000440240 PHOSPHO2Q8TCD6 241 aa24.11■■□□□ 1.45
CPNE1-219ENST00000440240 PPM1EQ8WY54 764 aa24.11■■□□□ 1.45
CPNE1-219ENST00000440240 FTOQ9C0B1 505 aaKnown RBP eCLIP24.11■■□□□ 1.455e-10■□□□□ 9.7
CPNE1-219ENST00000440240 MRVI1Q9Y6F6 885 aa24.11■■□□□ 1.45
CPNE1-219ENST00000440240 OPLAHO14841 1288 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 IFIT3O14879 490 aaKnown RBP24.1■■□□□ 1.45
CPNE1-219ENST00000440240 CYP21A2P08686 494 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 ADGRE1Q14246 886 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 TMEM67Q5HYA8 995 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 TJAP1Q5JTD0 557 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 PPP2R2DQ66LE6 453 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 KCNV1Q6PIU1 500 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 STOX1Q6ZVD7 989 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 DHX37Q8IY37 1157 aaKnown RBP24.1■■□□□ 1.45
CPNE1-219ENST00000440240 CAGE1Q8TC20 777 aa24.1■■□□□ 1.45
CPNE1-219ENST00000440240 CHMLP26374 656 aa24.09■■□□□ 1.45
CPNE1-219ENST00000440240 SART3Q15020 963 aaKnown RBP24.09■■□□□ 1.45
CPNE1-219ENST00000440240 RALYLQ86SE5 291 aaKnown RBP24.09■■□□□ 1.45
CPNE1-219ENST00000440240 AFAP1L1Q8TED9 768 aa24.09■■□□□ 1.45
CPNE1-219ENST00000440240 KAT2BQ92831 832 aa24.09■■□□□ 1.45
CPNE1-219ENST00000440240 SLC9A7Q96T83 725 aa24.09■■□□□ 1.45
CPNE1-219ENST00000440240 PDCD2LQ9BRP1 358 aa24.09■■□□□ 1.45
CPNE1-219ENST00000440240 PPP1R11O60927 126 aaPredicted RBP24.08■■□□□ 1.45
CPNE1-219ENST00000440240 MYOGP15173 224 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 GDF6Q6KF10 455 aaPredicted RBP24.08■■□□□ 1.45
CPNE1-219ENST00000440240 VSIG10LQ86VR7 867 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 C7orf31Q8N865 590 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 NCOA7Q8NI08 942 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 PPTC7Q8NI37 304 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 ATXN2LQ8WWM7 1075 aaKnown RBP24.08■■□□□ 1.45
CPNE1-219ENST00000440240 KATNAL1Q9BW62 490 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 RIOX1Q9H6W3 641 aa24.08■■□□□ 1.45
CPNE1-219ENST00000440240 PPFIA4O75335 1185 aa24.07■■□□□ 1.44
CPNE1-219ENST00000440240 PARNO95453 639 aaKnown RBP24.07■■□□□ 1.44
CPNE1-219ENST00000440240 MYCLP12524 364 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-219ENST00000440240 PTH1RQ03431 593 aa24.07■■□□□ 1.44
CPNE1-219ENST00000440240 GRM4Q14833 912 aa24.07■■□□□ 1.44
CPNE1-219ENST00000440240 HOMER1Q86YM7 354 aa24.07■■□□□ 1.44
CPNE1-219ENST00000440240 SPTBN5Q9NRC6 3674 aaKnown RBP24.06■■□□□ 1.44
CPNE1-219ENST00000440240 MYH6P13533 1939 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 KIF28PB7ZC32 967 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 GCOM1H8Y6P7 765 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-219ENST00000440240 BAIAP3O94812 1187 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 POLR2MP0CAP2 368 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 TGFB3P10600 412 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 WTAPQ15007 396 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 PIGSQ96S52 555 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 GTF2IRD1Q9UHL9 959 aa24.06■■□□□ 1.44
CPNE1-219ENST00000440240 CHD7Q9P2D1 2997 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 PNMA6FA0A0J9YX94 578 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 E7EWF7 191 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 SELPP16109 830 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 HOXA13P31271 388 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-219ENST00000440240 PSEN2P49810 448 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 TROAPQ12815 778 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 CCDC85BQ15834 202 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-219ENST00000440240 CTAGE1Q96RT6 745 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 THEGQ9P2T0 379 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 HDAC6Q9UBN7 1215 aa24.05■■□□□ 1.44
CPNE1-219ENST00000440240 RGS20O76081 388 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 RBL2Q08999 1139 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 MFSD10Q14728 455 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 PGM5Q15124 567 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 KIAA0753Q2KHM9 967 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 MYSM1Q5VVJ2 828 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 CATIPQ7Z7H3 387 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 TSPYL2Q9H2G4 693 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-219ENST00000440240 PRDM6Q9NQX0 595 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 KIAA1217Q5T5P2 1943 aa24.04■■□□□ 1.44
CPNE1-219ENST00000440240 HAS3O00219 553 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 SGSM2O43147 1006 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 F2P00734 622 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 CA3P07451 260 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 HOXD8P13378 290 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-219ENST00000440240 CCND2P30279 289 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 CELF3Q5SZQ8 465 aaKnown RBP24.03■■□□□ 1.44
CPNE1-219ENST00000440240 LRRC8DQ7L1W4 858 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 HERC6Q8IVU3 1022 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 SPATA33Q96N06 139 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 ALG1Q9BT22 464 aa24.03■■□□□ 1.44
CPNE1-219ENST00000440240 SCN5AQ14524 2016 aa24.02■■□□□ 1.44
CPNE1-219ENST00000440240 CYTH3O43739 400 aa24.02■■□□□ 1.44
CPNE1-219ENST00000440240 KCNJ6P48051 423 aa24.02■■□□□ 1.44
CPNE1-219ENST00000440240 PTK7Q13308 1070 aa24.02■■□□□ 1.44
CPNE1-219ENST00000440240 SLC35G1Q2M3R5 365 aa24.02■■□□□ 1.44
CPNE1-219ENST00000440240 FCHSD1Q86WN1 690 aa24.02■■□□□ 1.44
CPNE1-219ENST00000440240 MAP4K1Q92918 833 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms