RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CTCFLQ8NI51 663 aaPredicted RBP21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 PPP1R13LQ8WUF5 828 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 PBX4Q9BYU1 374 aa21.38■■□□□ 1.01
AC004540.1-201ENST00000439120 ZBBXA8MT70 800 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 PFKMP08237 780 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 KIF5BP33176 963 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 GHRHRQ02643 423 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 RAB30Q15771 203 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 DGKDQ16760 1214 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 NFXL1Q6ZNB6 911 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 DHX37Q8IY37 1157 aaKnown RBP21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 MB21D2Q8IYB1 491 aaPredicted RBP21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 PIBF1Q8WXW3 757 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 PDCD2LQ9BRP1 358 aa21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 DDX41Q9UJV9 622 aaKnown RBP21.37■■□□□ 1.01
AC004540.1-201ENST00000439120 CCND2P30279 289 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 PBX2P40425 430 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 ANTXR2P58335 489 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 BFSP2Q13515 415 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 LAMC2Q13753 1193 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 KCNV1Q6PIU1 500 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 DEFB128Q7Z7B8 93 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 FCHSD1Q86WN1 690 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 IGDCC4Q8TDY8 1250 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 CXXC1Q9P0U4 656 aaPredicted RBP21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 SLC4A7Q9Y6M7 1214 aa21.36■■□□□ 1.01
AC004540.1-201ENST00000439120 CCDC69A6NI79 296 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 PITPNM1O00562 1244 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 PRC1O43663 620 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 CYTH3O43739 400 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 DDAH1O94760 285 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 ACTN1P12814 892 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 MCM5P33992 734 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 GRIN2CQ14957 1233 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 PGM5Q15124 567 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 PTGISQ16647 500 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 ZNF654Q8IZM8 581 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 EMID1Q96A84 441 aaPredicted RBP21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 ESYT1Q9BSJ8 1104 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 KATNAL1Q9BW62 490 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 LY9Q9HBG7 655 aa21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 SEC63Q9UGP8 760 aaKnown RBP21.35■■□□□ 1.01
AC004540.1-201ENST00000439120 RFC2P35250 354 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 SLC35G1Q2M3R5 365 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 TMTC2Q8N394 836 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 PPTC7Q8NI37 304 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 RRP36Q96EU6 259 aaKnown RBP21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 MAP3K14Q99558 947 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 MTA3Q9BTC8 594 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 MYL10Q9BUA6 226 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 LSG1Q9H089 658 aaKnown RBP21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 ANO2Q9NQ90 1003 aa21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 BAZ2BQ9UIF8 2168 aaKnown RBP21.34■■□□□ 1.01
AC004540.1-201ENST00000439120 MYH7BA7E2Y1 1941 aa21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 VSIG10LQ86VR7 867 aa21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 C7orf31Q8N865 590 aa21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 TMEM87BQ96K49 555 aa21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 GAS2L1Q99501 681 aaPredicted RBP21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 LZTS2Q9BRK4 669 aa21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 FTOQ9C0B1 505 aaKnown RBP eCLIP21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 SLC28A3Q9HAS3 691 aa21.33■■□□□ 1.01
AC004540.1-201ENST00000439120 TANC1Q9C0D5 1861 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 SLC27A2O14975 620 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 GNAQP50148 359 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 CENPQQ7L2Z9 268 aaPredicted RBP21.32■■□□□ 1
AC004540.1-201ENST00000439120 SESTD1Q86VW0 696 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 IL31RAQ8NI17 732 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 CUL5Q93034 780 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 ALG1Q9BT22 464 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 SPZ1Q9BXG8 430 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 CDH23Q9H251 3354 aa21.32■■□□□ 1
AC004540.1-201ENST00000439120 SCN5AQ14524 2016 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 GBF1Q92538 1859 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 SORBS3O60504 671 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 GGPS1O95749 300 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 IQCF3P0C7M6 154 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 ZNF286BP0CG31 522 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 CALM1P0DP23 149 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 CALM2P0DP24 149 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 CALM3P0DP25 149 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 TGFB3P10600 412 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 ATP2A2P16615 1042 aaKnown RBP21.31■■□□□ 1
AC004540.1-201ENST00000439120 PSEN2P49810 448 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 GNPTABQ3T906 1256 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 CREB3L3Q68CJ9 461 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 GDF6Q6KF10 455 aaPredicted RBP21.31■■□□□ 1
AC004540.1-201ENST00000439120 SMARCC2Q8TAQ2 1214 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 CAGE1Q8TC20 777 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 KAT2BQ92831 832 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 SPATA33Q96N06 139 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 NKX2-4Q9H2Z4 354 aa21.31■■□□□ 1
AC004540.1-201ENST00000439120 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
AC004540.1-201ENST00000439120 RGS20O76081 388 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 SMARCA1P28370 1054 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 MFSD10Q14728 455 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 CELF3Q5SZQ8 465 aaKnown RBP21.3■■□□□ 1
AC004540.1-201ENST00000439120 RNF20Q5VTR2 975 aa21.3■■□□□ 1
AC004540.1-201ENST00000439120 MYSM1Q5VVJ2 828 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms